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    TK1a Thymidine kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819971, updated on 18-Sep-2024

    Summary

    Official Symbol
    TK1a
    Official Full Name
    Thymidine kinase
    Primary source
    TAIR:AT3G07800
    Locus tag
    AT3G07800
    See related
    Araport:AT3G07800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtTK1a; thymidine kinase 1a
    Summary
    Encodes a thymidine kinase that salvages DNA precursors.
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    Genomic context

    See TK1a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (2489387..2491180, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene potyvirus VPg interacting protein (DUF1423) Neighboring gene DGCR14-like protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene Pectin lyase-like superfamily protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    General gene information

    NM_111659.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytoplasm  

    General protein information

    Preferred Names
    Thymidine kinase
    NP_187437.1
    • Thymidine kinase; FUNCTIONS IN: thymidine kinase activity, ATP binding; INVOLVED IN: pyrimidine deoxyribonucleoside interconversion, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thymidine kinase (InterPro:IPR001267), Thymidine kinase, conserved site (InterPro:IPR020633); BEST Arabidopsis thaliana protein match is: Thymidine kinase (TAIR:AT5G23070.1); Has 4049 Blast hits to 4037 proteins in 1500 species: Archae - 38; Bacteria - 2547; Metazoa - 142; Fungi - 7; Plants - 74; Viruses - 356; Other Eukaryotes - 885 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2489387..2491180 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111659.4 → NP_187437.1  Thymidine kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187437.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDP6, Q9S750
      UniProtKB/TrEMBL
      A0A178VL17, A0A5S9XA66, A0A654F541
      Conserved Domains (1) summary
      cl23762
      Location:31 → 220
      TK; Thymidine kinase
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