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    P53/DNA damage-regulated protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820769, updated on 18-Sep-2024

    Summary

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    Official Full Name
    P53/DNA damage-regulated protein
    Primary source
    TAIR:AT3G15351
    Locus tag
    AT3G15351
    See related
    Araport:AT3G15351
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (5175948..5177721)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Legume lectin family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene cytochrome c oxidase 17

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001035622.2
    NM_001161146.1
    NM_001338155.1
    NM_001338156.1
    NM_001338157.1
    NM_112399.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    P53/DNA damage-regulated protein
    NP_001030699.1
    • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001154618.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 43 Blast hits to 43 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_566507.1
    • unknown protein; Has 50 Blast hits to 50 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5175948..5177721
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338154.1 → NP_001327626.1  P53/DNA damage-regulated protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IYP9, Q84WR6

    2. NM_112399.3 → NP_566507.1  P53/DNA damage-regulated protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566507.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V6H1, A0A384KNW2, Q84WR6, Q9LJR1

    3. NM_001338155.1 → NP_001327625.1  P53/DNA damage-regulated protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V6H1, A0A384KNW2, Q84WR6, Q9LJR1

    4. NM_001035622.2 → NP_001030699.1  P53/DNA damage-regulated protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030699.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DG98

    5. NM_001338156.1 → NP_001327628.1  P53/DNA damage-regulated protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IYP9, Q84WR6

    6. NM_001338157.1 → NP_001327627.1  P53/DNA damage-regulated protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DG98

    7. NM_001161146.1 → NP_001154618.1  P53/DNA damage-regulated protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154618.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IYP9, Q84WR6
    Nucleotide Protein
    Heading Accession and Version

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