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    MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822151, updated on 18-Sep-2024

    Summary

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    Official Full Name
    MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
    Primary source
    TAIR:AT3G25640
    Locus tag
    AT3G25640
    See related
    Araport:AT3G25640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (9333662..9334889)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ABC-2 type transporter family protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene SKP1-like 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_113462.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in hydrotropism IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
    NP_189192.1
    • Protein of unknown function, DUF617; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF617, plant (InterPro:IPR006460); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF617 (TAIR:AT5G23100.1); Has 258 Blast hits to 256 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 258; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9333662..9334889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338760.1 → NP_001326216.1  MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFJ4, A0A654FAT9, Q9LI79

    2. NM_113462.3 → NP_189192.1  MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189192.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFJ4, A0A654FAT9, Q84WS4
      Conserved Domains (1) summary
      pfam04759
      Location:98 → 266
      DUF617; Protein of unknown function, DUF617
    Nucleotide Protein
    Heading Accession and Version

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