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    ATM1 myosin 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821534, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATM1
    Official Full Name
    myosin 1
    Primary source
    TAIR:AT3G19960
    Locus tag
    AT3G19960
    See related
    Araport:AT3G19960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MYOSIN; myosin 1
    Summary
    member of Myosin-like proteins
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    Genomic context

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    See ATM1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    28
    Sequence:
    Chromosome: 3; NC_003074.8 (6948774..6957726)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene flower-specific, phytochrome-associated protein phosphatase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The class VIII myosin ATM1 is required for root apical meristem function. Olatunji D, et al. Development, 2023 Oct 15. PMID 37306290, Free PMC Article
    2. Molecular characterization and subcellular localization of Arabidopsis class VIII myosin, ATM1. Haraguchi T, et al. J Biol Chem, 2014 May 2. PMID 24637024, Free PMC Article
    3. Different subcellular localizations and functions of Arabidopsis myosin VIII. Golomb L, et al. BMC Plant Biol, 2008 Jan 8. PMID 18179725, Free PMC Article
    4. Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence. Reddy AS, et al. Genome Biol, 2001. PMID 11516337, Free PMC Article
    5. Molecular dissection of plant cytokinesis and phragmoplast structure: a survey of GFP-tagged proteins. Van Damme D, et al. Plant J, 2004 Nov. PMID 15469496

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The class VIII myosin ATM1 is required for root apical meristem function.
      Title: The class VIII myosin ATM1 is required for root apical meristem function.
    2. Data indicate that class VIII myosin, ATM1, has low enzymatic activity and high affinity for actin and is primarily localized at the cell cortex.
      Title: Molecular characterization and subcellular localization of Arabidopsis class VIII myosin, ATM1.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001161156.2
    NM_001338431.1
    NM_001338432.1
    NM_001338433.1
    NM_112886.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cytoskeletal motor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within actin filament-based movement TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in regulation of root meristem growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell plate HDA PubMed 
    located_in cell plate IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in endosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in phragmoplast HDA PubMed 
    is_active_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in plasmodesma IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin 1
    NP_001154628.2
    • myosin 1 (ATM1); CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50360.1); Has 7421 Blast hits to 6650 proteins in 772 species: Archae - 0; Bacteria - 19; Metazoa - 4930; Fungi - 705; Plants - 652; Viruses - 1; Other Eukaryotes - 1114 (source: NCBI BLink).
    NP_188630.1
    • myosin 1 (ATM1); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: plasma membrane, myosin complex, cell plate, phragmoplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50360.1); Has 7475 Blast hits to 6721 proteins in 784 species: Archae - 2; Bacteria - 30; Metazoa - 4940; Fungi - 735; Plants - 649; Viruses - 1; Other Eukaryotes - 1118 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6948774..6957726
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112886.4 → NP_188630.1  myosin 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188630.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWT2, Q9LHE9, Q9SNF0
      UniProtKB/TrEMBL
      A0A178VKI1, A0A5S9XE90, A0A7G2ELZ3
      Conserved Domains (2) summary
      cd01383
      Location:179 → 825
      MYSc_Myo8; class VIII myosin, motor domain
      pfam05557
      Location:957 → 1037
      MAD; Mitotic checkpoint protein

    2. NM_001161156.2 → NP_001154628.2  myosin 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154628.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XE90, A0A7G2ELZ3, F4JCF9
      Conserved Domains (2) summary
      smart00242
      Location:160 → 847
      MYSc; Myosin. Large ATPases
      cd01383
      Location:179 → 835
      MYSc_Myo8; class VIII myosin, motor domain

    3. NM_001338431.1 → NP_001325652.1  myosin 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LLW5

    4. NM_001338432.1 → NP_001325654.1  myosin 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWT2, Q9LHE9, Q9SNF0
      UniProtKB/TrEMBL
      A0A178VKI1, A0A5S9XE90, A0A7G2ELZ3
      Conserved Domains (2) summary
      cd01383
      Location:179 → 825
      MYSc_Myo8; class VIII myosin, motor domain
      pfam05557
      Location:957 → 1037
      MAD; Mitotic checkpoint protein

    5. NM_001338433.1 → NP_001325653.1  myosin 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWT2, Q9LHE9, Q9SNF0
      UniProtKB/TrEMBL
      A0A178VKI1, A0A5S9XE90, A0A7G2ELZ3
      Conserved Domains (2) summary
      cd01383
      Location:179 → 825
      MYSc_Myo8; class VIII myosin, motor domain
      pfam05557
      Location:957 → 1037
      MAD; Mitotic checkpoint protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LHE9.1

    Gene LinkOut

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