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    CRK CDPK-related kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824217, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CRK
    Official Full Name
    CDPK-related kinase
    Primary source
    TAIR:AT3G50530
    Locus tag
    AT3G50530
    See related
    Araport:AT3G50530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CDPK-related kinase
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    Genomic context

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    See CRK in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (18753337..18757145)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene LOB domain-containing protein 28 Neighboring gene Phosphoglycerate mutase family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Inactivation of plasma membrane-localized CDPK-RELATED KINASE5 decelerates PIN2 exocytosis and root gravitropic response in Arabidopsis. Rigó G, et al. Plant Cell, 2013 May. PMID 23673979, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data indicate that CRK5 (At3g50530) phosphorylates the hydrophilic loop of PIN2 (At5g57090) in vitro, and PIN2 shows accelerated accumulation in brefeldin bodies in the crk5 mutant.
      Title: Inactivation of plasma membrane-localized CDPK-RELATED KINASE5 decelerates PIN2 exocytosis and root gravitropic response in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001203119.1
    NM_114913.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CDPK-related kinase
    NP_001190048.1
    • CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1).
    NP_190622.1
    • CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1); Has 116660 Blast hits to 114838 proteins in 3097 species: Archae - 168; Bacteria - 14539; Metazoa - 43431; Fungi - 12865; Plants - 24050; Viruses - 569; Other Eukaryotes - 21038 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18753337..18757145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114913.4 → NP_190622.1  CDPK-related kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190622.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4J0N4, O04290, Q0WRC1, Q9SCS2
      UniProtKB/TrEMBL
      A0A178VE26, A0A5S9XJL0
      Conserved Domains (1) summary
      cd05117
      Location:147 → 409
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases

    2. NM_001203119.1 → NP_001190048.1  CDPK-related kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190048.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SCS2
      Conserved Domains (3) summary
      smart00220
      Location:148 → 441
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd05117
      Location:147 → 440
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
      cl14632
      Location:526 → 597
      Glo_EDI_BRP_like; This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SCS2.1

    Gene LinkOut

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