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    Fasciclin-like arabinogalactan family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824748, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Fasciclin-like arabinogalactan family protein
    Primary source
    TAIR:AT3G55820
    Locus tag
    AT3G55820
    See related
    Araport:AT3G55820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (20713709..20714825)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sedoheptulose-bisphosphatase Neighboring gene Pyruvate kinase family protein Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene Hs1pro-1 protein Neighboring gene Amidohydrolase family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115440.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Fasciclin-like arabinogalactan family protein
    NP_191141.1
    • Fasciclin-like arabinogalactan family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20713709..20714825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115440.3 → NP_191141.1  Fasciclin-like arabinogalactan family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191141.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCZ2, A0A5S9XL55, A0A654FG94, Q9M043
      Conserved Domains (1) summary
      PLN00049
      Location:142 → 197
      PLN00049; carboxyl-terminal processing protease; Provisional
    Nucleotide Protein
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