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    FAD/NAD(P)-binding oxidoreductase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833991, updated on 18-Sep-2024

    Summary

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    Official Full Name
    FAD/NAD(P)-binding oxidoreductase family protein
    Primary source
    TAIR:AT5G39940
    Locus tag
    AT5G39940
    See related
    Araport:AT5G39940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MYH19.13; MYH19_13
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    16
    Sequence:
    Chromosome: 5; NC_003076.8 (15987461..15990701)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pre-mRNA cleavage complex II protein Neighboring gene CLP1-similar protein 5 Neighboring gene thioredoxin 2 Neighboring gene pseudo Neighboring gene GTP-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203511.1
    NM_001344311.1
    NM_123357.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    FAD/NAD(P)-binding oxidoreductase family protein
    NP_001190440.1
    • FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like (InterPro:IPR004792).
    NP_198810.2
    • FAD/NAD(P)-binding oxidoreductase family protein; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like (InterPro:IPR004792); Has 4590 Blast hits to 4585 proteins in 1655 species: Archae - 24; Bacteria - 3709; Metazoa - 1; Fungi - 2; Plants - 41; Viruses - 0; Other Eukaryotes - 813 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15987461..15990701
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344310.1 → NP_001332364.1  FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAI8, A0A1P8BGQ3

    2. NM_001203511.1 → NP_001190440.1  FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190440.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAI8, A0A5S9Y9F4, F4KFW9
      Conserved Domains (3) summary
      pfam03486
      Location:68 → 447
      HI0933_like; HI0933-like protein
      cl17171
      Location:126 → 207
      PH-like; Pleckstrin homology-like domain
      cl21454
      Location:279 → 458
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    3. NM_001344311.1 → NP_001332363.1  FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAI8, A0A1P8BGP7, A0A5S9Y9F4

    4. NM_123357.2 → NP_198810.2  FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198810.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAI8, A0A654G724, Q8GUI2
      Conserved Domains (1) summary
      pfam03486
      Location:68 → 459
      HI0933_like; HI0933-like protein
    Nucleotide Protein
    Heading Accession and Version

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