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    TAT7 Tyrosine transaminase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835480, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TAT7
    Official Full Name
    Tyrosine transaminase family protein
    Primary source
    TAIR:AT5G53970
    Locus tag
    AT5G53970
    See related
    Araport:AT5G53970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K19P17.14; K19P17_14; tyrosine aminotransferase 7
    Summary
    encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment
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    Genomic context

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    See TAT7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (21910471..21912809)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Mid-1-related chloride channel domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene homeobox protein 52

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A tyrosine aminotransferase involved in tocopherol synthesis in Arabidopsis. Riewe D, et al. Plant J, 2012 Sep. PMID 22540282
    2. TAT1 and TAT2 tyrosine aminotransferases have both distinct and shared functions in tyrosine metabolism and degradation in Arabidopsis thaliana. Wang M, et al. J Biol Chem, 2019 Mar 8. PMID 30630953, Free PMC Article
    3. Biochemical properties and subcellular localization of tyrosine aminotransferases in Arabidopsis thaliana. Wang M, et al. Phytochemistry, 2016 Dec. PMID 27726859
    4. Tocopherol content and activities of tyrosine aminotransferase and cystine lyase in Arabidopsis under stress conditions. Holländer-Czytko H, et al. J Plant Physiol, 2005 Jul. PMID 16008101
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_124776.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables L-tyrosine-2-oxoglutarate transaminase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables L-tyrosine-2-oxoglutarate transaminase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables L-tyrosine-2-oxoglutarate transaminase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables L-tyrosine-2-oxoglutarate transaminase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within tyrosine catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within vitamin E biosynthetic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within vitamin E biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Tyrosine transaminase family protein
    NP_200208.1
    • Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21910471..21912809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124776.5 → NP_200208.1  Tyrosine transaminase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200208.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H146, Q9FN30
      UniProtKB/TrEMBL
      A0A5S9YDU8
      Conserved Domains (2) summary
      cd00609
      Location:36 → 400
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PLN02656
      Location:1 → 411
      PLN02656; tyrosine transaminase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FN30.1

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