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    HVA22B HVA22 homologue B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836369, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HVA22B
    Official Full Name
    HVA22 homologue B
    Primary source
    TAIR:AT5G62490
    Locus tag
    AT5G62490
    See related
    Araport:AT5G62490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B; ATHVA22B; HVA22 homologue B; K19B1.10; K19B1_10
    Summary
    Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.
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    Genomic context

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    See HVA22B in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (25090091..25091559)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene glutathione S-transferase tau 9 Neighboring gene end binding protein 1B Neighboring gene F-box family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtHVA22 gene family in Arabidopsis: phylogenetic relationship, ABA and stress regulation, and tissue-specific expression. Chen CN, et al. Plant Mol Biol, 2002 Aug. PMID 12081371
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_125643.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within hyperosmotic salinity response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    HVA22 homologue B
    NP_201055.1
    • HVA22 homologue B (HVA22B); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: hyperosmotic salinity response, response to abscisic acid stimulus; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: TB2/DP1/HVA22 related protein (InterPro:IPR004345); BEST Arabidopsis thaliana protein match is: HVA22 homologue A (TAIR:AT1G74520.1); Has 1456 Blast hits to 1456 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 209; Plants - 491; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25090091..25091559
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125643.5 → NP_201055.1  HVA22 homologue B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201055.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SYX7, Q9XFG2
      UniProtKB/TrEMBL
      A0A178UR24, A0A5S9YGC8
      Conserved Domains (1) summary
      pfam03134
      Location:29 → 105
      TB2_DP1_HVA22; TB2/DP1, HVA22 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SYX7.2

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