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    Poteh POTE ankyrin domain family member H [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100363368, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Potehprovided by RGD
    Official Full Name
    POTE ankyrin domain family member Hprovided by RGD
    Primary source
    RGD:2323175
    See related
    AllianceGenome:RGD:2323175
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human POTEH (POTE ankyrin domain family member H). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 26.3), Lung (RPKM 13.8) and 9 other tissues See more
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    Genomic context

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    See Poteh in Genome Data Viewer
    Location:
    15p14
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (19559450..19654345)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (17131582..17219924)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (18919299..19008178)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene filamin B Neighboring gene uncharacterized LOC134482086 Neighboring gene ribosomal protein S19, pseudogene 15 Neighboring gene UTP4 small subunit processome component, pseudogene 1 Neighboring gene replication factor C subunit 5, pseudogene 2 Neighboring gene ubiquitin-conjugating enzyme E2G 1 like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    ankyrin repeat domain-containing protein 26-like; coiled-coil domain-containing protein 144A-like
    Names
    mCG11429-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      19559450..19654345
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008770604.4 → XP_008768826.1  ankyrin repeat domain-containing protein 26-like isoform X2

      See identical proteins and their annotated locations for XP_008768826.1

      Conserved Domains (6) summary
      cd00204
      Location:49 → 174
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12001
      Location:939 → 1038
      DUF3496; Domain of unknown function (DUF3496)
      pfam12796
      Location:59 → 150
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:25 → 75
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:140 → 179
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:54 → 85
      ANK; ANK repeat [structural motif]

    2. XM_006251787.5 → XP_006251849.1  ankyrin repeat domain-containing protein 26-like isoform X1

      See identical proteins and their annotated locations for XP_006251849.1

      Conserved Domains (6) summary
      cd00204
      Location:49 → 174
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12001
      Location:939 → 1038
      DUF3496; Domain of unknown function (DUF3496)
      pfam12796
      Location:59 → 150
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:25 → 75
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:140 → 179
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:54 → 85
      ANK; ANK repeat [structural motif]

    3. XM_008770605.4 → XP_008768827.1  ankyrin repeat domain-containing protein 26-like isoform X4

      See identical proteins and their annotated locations for XP_008768827.1

      Conserved Domains (6) summary
      cd00204
      Location:49 → 174
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12001
      Location:875 → 974
      DUF3496; Domain of unknown function (DUF3496)
      pfam12796
      Location:59 → 150
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:25 → 75
      Ank_4; Ankyrin repeats (many copies)
      pfam13857
      Location:140 → 179
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:54 → 85
      ANK; ANK repeat [structural motif]

    4. XM_039093754.2 → XP_038949682.1  ankyrin repeat domain-containing protein 26-like isoform X3

      Conserved Domains (4) summary
      COG1196
      Location:706 → 964
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      sd00045
      Location:54 → 85
      ANK; ANK repeat [structural motif]
      pfam12001
      Location:885 → 984
      DUF3496; Domain of unknown function (DUF3496)
      pfam12796
      Location:25 → 118
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_063274849.1 → XP_063130919.1  coiled-coil domain-containing protein 144A-like isoform X5

    6. XM_063274848.1 → XP_063130918.1  coiled-coil domain-containing protein 144A-like isoform X5

    7. XM_063274850.1 → XP_063130920.1  ankyrin repeat domain-containing protein 26-like isoform X6

    RNA

    1. XR_010058107.1 RNA Sequence

    2. XR_010058106.1 RNA Sequence

    3. XR_010058108.1 RNA Sequence

    4. XR_010058105.1 RNA Sequence

    5. XR_005493877.2 RNA Sequence

    6. XR_001841483.3 RNA Sequence

    7. XR_005493880.2 RNA Sequence

    8. XR_005493879.2 RNA Sequence

    9. XR_005493882.2 RNA Sequence

    10. XR_005493884.2 RNA Sequence

    11. XR_005493886.2 RNA Sequence

    12. XR_005493881.2 RNA Sequence

    13. XR_005493883.2 RNA Sequence

    14. XR_005493885.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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