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    Igkv16-104 immunoglobulin kappa variable 16-104 [ Mus musculus (house mouse) ]

    Gene ID: 381778, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Igkv16-104provided by MGI
    Official Full Name
    immunoglobulin kappa variable 16-104provided by MGI
    Primary source
    MGI:MGI:2685913
    See related
    Ensembl:ENSMUSG00000076522 IMGT/GENE-DB:IGKV16-104; AllianceGenome:MGI:2685913
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    rf; Gm1067
    Summary
    Predicted to be involved in immune response. Predicted to be part of immunoglobulin complex. Orthologous to several human genes including IGKV1-37 (immunoglobulin kappa variable 1-37 (non-functional)). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See Igkv16-104 in Genome Data Viewer
    Location:
    6 C1; 6 31.17 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (68402589..68403056)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (68425605..68426072)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa chain complex Neighboring gene STARR-seq mESC enhancer starr_16199 Neighboring gene STARR-seq mESC enhancer starr_16200 Neighboring gene immunoglobulin kappa chain variable 2-105 Neighboring gene immunoglobulin kappa chain variable 15-103 Neighboring gene immunoglobulin kappa chain variable 15-102 Neighboring gene cortactin pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular analysis of the murine lupus-associated anti-self response: involvement of a large number of heavy and light chain variable region genes. Kofler R, et al. Eur J Immunol, 1987 Jan. PMID 3102255
    2. Many variable region genes are utilized in the antibody response of BALB/c mice to the influenza virus A/PR/8/34 hemagglutinin. Caton AJ, et al. J Immunol, 1991 Sep 1. PMID 1908881
    3. Sequences of 12 monoclonal anti-dinitrophenyl spin-label antibodies for NMR studies. Leahy DJ, et al. Proc Natl Acad Sci U S A, 1988 Jun. PMID 3375235, Free PMC Article
    4. Characteristics of the immunoglobulin Vkappa genes, pseudogenes, relics and orphons in the mouse genome. Schäble KF, et al. Eur J Immunol, 1999 Jul. PMID 10427970
    5. IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Giudicelli V, et al. Nucleic Acids Res, 2005 Jan 1. PMID 15608191, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Other Names

    • IgM (kappa)light-chain
    • immunoglobulin kappa chain variable 16-104
    • immunoglobulin kappa-chain VK-1
    • immunoglobulin light chain variable region

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of immunoglobulin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_005612.1 

      Range
      870625..871092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      68402589..68403056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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