U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y34D9A.8 Conserved plasma membrane protein;Low-density lipoprotein receptor domain class A;Transmembrane protein [ Caenorhabditis elegans ]

    Gene ID: 189589, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y34D9A.8
    Official Full Name
    Conserved plasma membrane protein;Low-density lipoprotein receptor domain class A;Transmembrane protein
    Primary source
    WormBase:WBGene00021333
    Locus tag
    CELE_Y34D9A.8
    See related
    AllianceGenome:WB:WBGene00021333
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y34D9A.8 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (1050651..1053826, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene MIF4G domain-containing protein;THO complex subunit 2;TPR_REGION domain-containing protein;Uncharacterized protein Neighboring gene PSP domain-containing protein;PSP proline-rich domain-containing protein Neighboring gene Glutaredoxin-1 Neighboring gene vesicle-fusing ATPase Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene Guanine nucleotide-binding protein G(s) subunit alpha

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Conserved plasma membrane protein;Low-density lipoprotein receptor domain class A;Transmembrane protein
    NP_001076619.1
    • Confirmed by transcript evidence
    NP_001367694.1
    • Confirmed by transcript evidence
    NP_001368423.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      1050651..1053826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001083150.3 → NP_001076619.1  Conserved plasma membrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001076619.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N455

    2. NM_001380892.2 → NP_001367694.1  Low-density lipoprotein receptor domain class A [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A4UVM2
      Conserved Domains (1) summary
      cd00112
      Location:41 → 71
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

    3. NM_001380911.1 → NP_001368423.1  Transmembrane protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLV4
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools