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    • Showing Current items.

    T13A10.2 RING-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188459, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T13A10.2
    Official Full Name
    RING-type domain-containing protein
    Primary source
    WormBase:WBGene00020469
    Locus tag
    CELE_T13A10.2
    See related
    AllianceGenome:WB:WBGene00020469
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T13A10.2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_003282.8 (6253300..6253785)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Acyl-coenzyme A oxidase acox-3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Histidine-rich glycoprotein-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RING-type domain-containing protein
    NP_500945.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      6253300..6253785
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068544.3 → NP_500945.1  RING-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500945.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22441
      Conserved Domains (3) summary
      TIGR02169
      Location:14 → 92
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd00162
      Location:97 → 142
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      cl17238
      Location:97 → 142
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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