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    manf-1 Mesencephalic astrocyte-derived neurotrophic factor homolog [ Caenorhabditis elegans ]

    Gene ID: 177074, updated on 9-Dec-2024

    Summary

    Official Symbol
    manf-1
    Official Full Name
    Mesencephalic astrocyte-derived neurotrophic factor homolog
    Primary source
    WormBase:WBGene00021888
    Locus tag
    CELE_Y54G2A.23
    See related
    AllianceGenome:WB:WBGene00021888
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables sulfatide binding activity. Involved in developmental growth and regulation of response to endoplasmic reticulum stress. Predicted to be located in endoplasmic reticulum lumen and extracellular region. Predicted to be active in endoplasmic reticulum and extracellular space. Is expressed in several structures, including anus; excretory gland cell; pharynx; rectal valve cell; and somatic cell. Human ortholog(s) of this gene implicated in Parkinsonism; breast cancer; carcinoma (multiple); and pancreatic cancer. Orthologous to several human genes including CDNF (cerebral dopamine neurotrophic factor). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See manf-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (2927517..2928421, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene F-box C protein Neighboring gene Ubiquitin-conjugating enzyme E2 13 Neighboring gene Molybdate-anion transporter Neighboring gene pseudo

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sulfatide binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in ATF6-mediated unfolded protein response ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in developmental growth IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in dopaminergic neuron differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuron projection development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of response to endoplasmic reticulum stress IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Mesencephalic astrocyte-derived neurotrophic factor homolog
    NP_500273.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      2927517..2928421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067872.9NP_500273.2  Mesencephalic astrocyte-derived neurotrophic factor homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500273.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9N3B0
      Conserved Domains (1) summary
      pfam10208
      Location:21165
      Armet; Degradation arginine-rich protein for mis-folding