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    T24A6.16 LisH domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188833, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T24A6.16
    Official Full Name
    LisH domain-containing protein
    Primary source
    WormBase:WBGene00020753
    Locus tag
    CELE_T24A6.16
    See related
    AllianceGenome:WB:WBGene00020753
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process and positive regulation of response to oxidative stress. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T24A6.16 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (3561460..3562924, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene GNAT family N-acetyltransferase Neighboring gene pseudo Neighboring gene UBC core domain-containing protein Neighboring gene UBC core domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables chondroitin 4-sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in chondroitin sulfate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in positive regulation of response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    LisH domain-containing protein
    NP_001309660.1
    • Confirmed by transcript evidence
    NP_504002.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      3561460..3562924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071601.3 → NP_504002.2  LisH domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504002.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O61952
      Conserved Domains (1) summary
      pfam03567
      Location:52 → 286
      Sulfotransfer_2; Sulfotransferase family

    2. NM_001322536.1 → NP_001309660.1  LisH domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MCY9
      Conserved Domains (1) summary
      cl22970
      Location:1 → 81
      Sulfotransfer_2; Sulfotransferase family
    Nucleotide Protein
    Heading Accession and Version

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