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    idpb-1 Intrinsically Disordered Protein, class B [ Caenorhabditis elegans ]

    Gene ID: 173879, updated on 4-Jan-2025

    Summary

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    Official Symbol
    idpb-1
    Official Full Name
    Intrinsically Disordered Protein, class B
    Primary source
    WormBase:WBGene00015458
    Locus tag
    CELE_C04G6.10
    See related
    AllianceGenome:WB:WBGene00015458
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in pm6. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See idpb-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003280.10 (5101984..5102679)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Intrinsically Disordered Protein, class B Neighboring gene Uncharacterized protein Neighboring gene Mitogen-activated protein kinase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In vitro and in vivo characterization of Caenorhabditis elegans PHA-4/FoxA response elements. Raharjo WH, et al. Dev Dyn, 2010 Aug. PMID 20623595
    2. Systematic interactome mapping and genetic perturbation analysis of a C. elegans TGF-beta signaling network. Tewari M, et al. Mol Cell, 2004 Feb 27. PMID 14992718
    3. A spatiotemporal reconstruction of the C. elegans pharyngeal cuticle reveals a structure rich in phase-separating proteins. Kamal M, et al. Elife, 2022 Oct 19. PMID 36259463, Free PMC Article
    4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    Intrinsically Disordered Protein, class B
    NP_494944.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class idpb

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      5101984..5102679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062543.6 → NP_494944.1  Intrinsically Disordered Protein, class B [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494944.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95QY1
    Nucleotide Protein
    Heading Accession and Version

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