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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001108539.3 → NP_001102009.2 E3 ubiquitin-protein ligase HACE1
See identical proteins and their annotated locations for NP_001102009.2
Status: PROVISIONAL
- Source sequence(s)
-
JAXUCZ010000020
- UniProtKB/Swiss-Prot
- D3ZBM7, D3ZBM8
- UniProtKB/TrEMBL
-
A0A8I6ADJ5
- Related
- ENSRNOP00000000365.4, ENSRNOT00000000365.6
- Conserved Domains (7) summary
-
- smart00248
Location:66 → 93
- ANK; ankyrin repeats
- smart00119
Location:579 → 902
- HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
- cd00078
Location:554 → 903
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- cd00204
Location:92 → 217
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:69 → 194
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:199 → 249
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:97 → 128
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086038.1 Reference GRCr8
- Range
-
50618004..50733460
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006256595.5 → XP_006256657.1 E3 ubiquitin-protein ligase HACE1 isoform X1
- UniProtKB/TrEMBL
-
A0A8I6ADJ5
- Related
- ENSRNOP00000090381.1, ENSRNOT00000111799.2
- Conserved Domains (7) summary
-
- smart00248
Location:66 → 93
- ANK; ankyrin repeats
- smart00119
Location:586 → 909
- HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
- cd00078
Location:561 → 910
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- cd00204
Location:92 → 217
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:69 → 194
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:199 → 249
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:97 → 128
- ANK; ANK repeat [structural motif]
-
XM_006256597.5 → XP_006256659.1 E3 ubiquitin-protein ligase HACE1 isoform X7
- UniProtKB/TrEMBL
-
A0A8I6ADJ5
- Related
- ENSRNOP00000104608.1, ENSRNOT00000139890.1
- Conserved Domains (7) summary
-
- smart00248
Location:66 → 93
- ANK; ankyrin repeats
- smart00119
Location:586 → 865
- HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
- cd00078
Location:561 → 866
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- cd00204
Location:92 → 217
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- pfam12796
Location:69 → 194
- Ank_2; Ankyrin repeats (3 copies)
- pfam13637
Location:199 → 249
- Ank_4; Ankyrin repeats (many copies)
- sd00045
Location:97 → 128
- ANK; ANK repeat [structural motif]
-
XM_039098889.2 → XP_038954817.1 E3 ubiquitin-protein ligase HACE1 isoform X2
- UniProtKB/TrEMBL
-
A0A8I6ADJ5
- Conserved Domains (4) summary
-
- COG0666
Location:83 → 220
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00078
Location:561 → 893
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:97 → 128
- ANK; ANK repeat [structural motif]
- pfam12796
Location:34 → 126
- Ank_2; Ankyrin repeats (3 copies)
-
XM_063279320.1 → XP_063135390.1 E3 ubiquitin-protein ligase HACE1 isoform X3
- UniProtKB/TrEMBL
-
A0A8I6ADJ5
-
XM_039098892.2 → XP_038954820.1 E3 ubiquitin-protein ligase HACE1 isoform X8
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Conserved Domains (4) summary
-
- cd00078
Location:517 → 866
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:66 → 95
- ANK; ANK repeat [structural motif]
- pfam12796
Location:69 → 179
- Ank_2; Ankyrin repeats (3 copies)
- cl39094
Location:157 → 207
- Ank_2; Ankyrin repeats (3 copies)
-
XM_039098894.2 → XP_038954822.1 E3 ubiquitin-protein ligase HACE1 isoform X9
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Related
- ENSRNOP00000107784.1, ENSRNOT00000141456.1
- Conserved Domains (4) summary
-
- cd00078
Location:510 → 859
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:66 → 95
- ANK; ANK repeat [structural motif]
- pfam12796
Location:69 → 179
- Ank_2; Ankyrin repeats (3 copies)
- cl39094
Location:157 → 207
- Ank_2; Ankyrin repeats (3 copies)
-
XM_039098891.2 → XP_038954819.1 E3 ubiquitin-protein ligase HACE1 isoform X5
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Related
- ENSRNOP00000101439.1, ENSRNOT00000146450.1
- Conserved Domains (3) summary
-
- COG0666
Location:33 → 185
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00078
Location:526 → 875
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:95 → 126
- ANK; ANK repeat [structural motif]
-
XM_039098895.2 → XP_038954823.1 E3 ubiquitin-protein ligase HACE1 isoform X11
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Conserved Domains (3) summary
-
- cd00078
Location:482 → 831
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:66 → 115
- ANK; ANK repeat [structural motif]
- pfam12796
Location:69 → 172
- Ank_2; Ankyrin repeats (3 copies)
-
XM_039098890.2 → XP_038954818.1 E3 ubiquitin-protein ligase HACE1 isoform X4
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Conserved Domains (3) summary
-
- COG0666
Location:53 → 190
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd00078
Location:531 → 880
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:67 → 98
- ANK; ANK repeat [structural motif]
-
XM_063279321.1 → XP_063135391.1 E3 ubiquitin-protein ligase HACE1 isoform X6
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Related
- ENSRNOP00000085147.2, ENSRNOT00000106005.2
-
XM_063279322.1 → XP_063135392.1 E3 ubiquitin-protein ligase HACE1 isoform X10
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Related
- ENSRNOP00000110872.1, ENSRNOT00000130620.1
-
XM_039098899.2 → XP_038954827.1 E3 ubiquitin-protein ligase HACE1 isoform X15
- UniProtKB/TrEMBL
-
A6K6U6
- Conserved Domains (3) summary
-
- COG0666
Location:83 → 220
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- sd00045
Location:97 → 128
- ANK; ANK repeat [structural motif]
- pfam12796
Location:34 → 126
- Ank_2; Ankyrin repeats (3 copies)
-
XM_039098896.2 → XP_038954824.1 E3 ubiquitin-protein ligase HACE1 isoform X12
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Conserved Domains (4) summary
-
- cd00078
Location:448 → 797
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
- sd00045
Location:17 → 48
- ANK; ANK repeat [structural motif]
- pfam13637
Location:4 → 38
- Ank_4; Ankyrin repeats (many copies)
- pfam12796
Location:22 → 110
- Ank_2; Ankyrin repeats (3 copies)
-
XM_063279324.1 → XP_063135394.1 E3 ubiquitin-protein ligase HACE1 isoform X12
- UniProtKB/TrEMBL
-
A0A8I6A1L8
-
XM_039098897.2 → XP_038954825.1 E3 ubiquitin-protein ligase HACE1 isoform X13
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Conserved Domains (1) summary
-
- cd00078
Location:393 → 742
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
-
XM_039098898.2 → XP_038954826.1 E3 ubiquitin-protein ligase HACE1 isoform X14
- UniProtKB/TrEMBL
-
A0A8I6A1L8
- Conserved Domains (1) summary
-
- cd00078
Location:386 → 735
- HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...