Pigm phosphatidylinositol glycan anchor biosynthesis, class M [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Pigmprovided by RGD
Full Name: phosphatidylinositol glycan anchor biosynthesis, class Mprovided by RGD
Primary source: RGD:71041
See related: EnsemblRapid:ENSRNOG00000007735 AllianceGenome:RGD:71041
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: GPI-MT-I
Summary: Enables mannosyltransferase activity. Involved in GPI anchor biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of glycosylphosphatidylinositol-mannosyltransferase I complex. Orthologous to human PIGM (phosphatidylinositol glycan anchor biosynthesis class M). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: 13q24

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	13	NC_086031.1 (87370693..87374390)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	13	NC_051348.1 (84838329..84842026)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	13	NC_005112.4 (90759260..90762957)

Chromosome 13 - NC_086031.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

RH141295 (e-PCR)
- UniSTS:223291

AI644422 (e-PCR)
- UniSTS:185458

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables alpha-1,4-mannosyltransferase activity	IEA Inferred from Electronic Annotation more info
enables glycolipid mannosyltransferase activity	IEA Inferred from Electronic Annotation more info
enables mannosyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables mannosyltransferase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
involved_in GPI anchor biosynthetic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in GPI anchor biosynthetic process	IDA Inferred from Direct Assay more info	PubMed
involved_in GPI anchor biosynthetic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
part_of glycosylphosphatidylinositol-mannosyltransferase I complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: GPI mannosyltransferase 1

Names: GPI mannosyltransferase I; PIG-M mRNA for mannosyltransferase; phosphatidylinositol glycan, class M; phosphatidylinositol-glycan biosynthesis class M protein

NP_077058.1

EC 2.4.1.-

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.