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    ATCHX13 Cation/hydrogen exchanger family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817574, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATCHX13
    Official Full Name
    Cation/hydrogen exchanger family protein
    Primary source
    TAIR:AT2G30240
    Locus tag
    AT2G30240
    See related
    Araport:AT2G30240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CATION/H+ EXCHANGER 13; CHX13; T9D9.5; T9D9_5
    Summary
    Encodes a plasma membrane localized potassium transporter.
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    Genomic context

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    See ATCHX13 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (12899575..12902815, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene GDSL-like Lipase/Acylhydrolase family protein Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase Neighboring gene WRKY DNA-binding protein 25 Neighboring gene U2 small nuclear ribonucleoprotein B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtCHX13 is a plasma membrane K+ transporter. Zhao J, et al. Plant Physiol, 2008 Oct. PMID 18676662, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128577.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables potassium ion transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables potassium ion transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables potassium ion transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables sodium:proton antiporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within potassium ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within potassium ion transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Cation/hydrogen exchanger family protein
    NP_180583.1
    • ATCHX13; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/hydrogen exchanger 14 (TAIR:AT1G06970.1); Has 5085 Blast hits to 5064 proteins in 1363 species: Archae - 243; Bacteria - 3825; Metazoa - 0; Fungi - 120; Plants - 544; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12899575..12902815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128577.2 → NP_180583.1  Cation/hydrogen exchanger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180583.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22920, Q58P68
      UniProtKB/TrEMBL
      A0A178VQV1, A0A5S9X2K4, A0A654EXH2
      Conserved Domains (1) summary
      PLN03159
      Location:28 → 785
      PLN03159; cation/H(+) antiporter 15; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O22920.1

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