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    CIPK7 CBL-interacting protein kinase 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821874, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CIPK7
    Official Full Name
    CBL-interacting protein kinase 7
    Primary source
    TAIR:AT3G23000
    Locus tag
    AT3G23000
    See related
    Araport:AT3G23000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSR2; ATSRPK1; CBL-interacting protein kinase 7; PKS7; SNF1-RELATED PROTEIN KINASE 3.10; SnRK3.10
    Summary
    Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2.
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    Genomic context

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    See CIPK7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (8172479..8174142)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S5/Elongation factor G/III/V family protein Neighboring gene ARM repeat superfamily protein Neighboring gene receptor like protein 36 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A protein kinase binds the C-terminal domain of the readthrough protein of Turnip yellows virus and regulates virus accumulation. Rodriguez-Medina C, et al. Virology, 2015 Dec. PMID 26402374
    2. CIPK7 is involved in cold response by interacting with CBL1 in Arabidopsis thaliana. Huang C, et al. Plant Sci, 2011 Jul. PMID 21600398
    3. Variable interactions between sucrose non-fermented 1-related protein kinases and regulatory proteins in higher plants. Nozawa A, et al. Biosci Biotechnol Biochem, 2003 Dec. PMID 14730130
    4. Calcium sensors and their interacting protein kinases: genomics of the Arabidopsis and rice CBL-CIPK signaling networks. Kolukisaoglu U, et al. Plant Physiol, 2004 Jan. PMID 14730064, Free PMC Article
    5. Arabidopsis phosphatidylinositol phosphate kinase 1 binds F-actin and recruits phosphatidylinositol 4-kinase beta1 to the actin cytoskeleton. Davis AJ, et al. J Biol Chem, 2007 May 11. PMID 17379598

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CIPK7 of Arabidopsis binds the C-terminal domain of the readthrough protein of Turnip yellows virus and regulates virus.
      Title: A protein kinase binds the C-terminal domain of the readthrough protein of Turnip yellows virus and regulates virus accumulation.
    2. CIPK7, after being activated by CBL1, may regulate the activity of other protein components involved in cold responses.
      Title: CIPK7 is involved in cold response by interacting with CBL1 in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_113200.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CBL-interacting protein kinase 7
    NP_188940.1
    • CBL-interacting protein kinase 7 (CIPK7); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 4 (TAIR:AT4G14580.1); Has 129268 Blast hits to 127250 proteins in 4353 species: Archae - 172; Bacteria - 15520; Metazoa - 47044; Fungi - 13122; Plants - 31560; Viruses - 528; Other Eukaryotes - 21322 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8172479..8174142
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113200.3 → NP_188940.1  CBL-interacting protein kinase 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188940.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93Y18, Q9FZN7, Q9XIW0
      UniProtKB/TrEMBL
      A0A178VLC2, A0A5S9XET3
      Conserved Domains (2) summary
      cd12195
      Location:308 → 385
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      cl21453
      Location:24 → 279
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9XIW0.1

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