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    DNAse I-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829214, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNAse I-like superfamily protein
    Primary source
    TAIR:AT4G30900
    Locus tag
    AT4G30900
    See related
    Araport:AT4G30900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6I18.190; F6I18_190
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (15039336..15042401)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene ubiquitin-specific protease 24 Neighboring gene Cytosol aminopeptidase family protein Neighboring gene Cytosol aminopeptidase family protein Neighboring gene Ribosomal protein L21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001125610.2
    NM_001342045.1
    NM_119237.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNAse I-like superfamily protein
    NP_001119082.1
    • DNAse I-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_194819.3
    • DNAse I-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); Has 827 Blast hits to 827 proteins in 297 species: Archae - 8; Bacteria - 571; Metazoa - 2; Fungi - 103; Plants - 24; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15039336..15042401
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125610.2 → NP_001119082.1  DNAse I-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119082.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUX9, A0A384LCE2, A0A5S9XXS1, A0A654FUF1, F4JR41
      Conserved Domains (1) summary
      cd09083
      Location:6 → 293
      EEP-1; Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1

    2. NM_119237.4 → NP_194819.3  DNAse I-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194819.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUX9, A0A384LCE2, A0A5S9XXS1, A0A654FUF1, F4JR41
      Conserved Domains (1) summary
      cd09083
      Location:6 → 293
      EEP-1; Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1

    3. NM_001342045.1 → NP_001329622.1  DNAse I-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUX9, A0A384LCE2, A0A5S9XXS1, A0A654FUF1, F4JR41
      Conserved Domains (1) summary
      cd09083
      Location:6 → 293
      EEP-1; Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1
    Nucleotide Protein
    Heading Accession and Version

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