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    BRCT domain-containing DNA repair protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823509, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BRCT domain-containing DNA repair protein
    Primary source
    TAIR:AT3G43930
    Locus tag
    AT3G43930
    See related
    Araport:AT3G43930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (15760817..15763406, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene MutS2 Neighboring gene dicer-like 3 Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001035729.4
    NM_001339117.1
    NM_114261.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BRCT domain-containing DNA repair protein
    NP_001030806.2
    • BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26270.1); Has 307 Blast hits to 302 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 87; Plants - 55; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
    NP_189979.3
    • BRCT domain-containing DNA repair protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: BRCT (InterPro:IPR001357); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26270.1); Has 308 Blast hits to 303 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 87; Plants - 56; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      15760817..15763406 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114261.3 → NP_189979.3  BRCT domain-containing DNA repair protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189979.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8N9, Q6DSR3
      Conserved Domains (1) summary
      cl00038
      Location:60 → 126
      BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...

    2. NM_001035729.4 → NP_001030806.2  BRCT domain-containing DNA repair protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030806.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8N9, Q6DSR1
      Conserved Domains (1) summary
      cl00038
      Location:60 → 126
      BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...

    3. NM_001339117.1 → NP_001327092.1  BRCT domain-containing DNA repair protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LR89
    Nucleotide Protein
    Heading Accession and Version

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