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    RMI1 recQ-mediated instability protein (DUF1767) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836473, updated on 18-Sep-2024

    Summary

    Official Symbol
    RMI1
    Official Full Name
    recQ-mediated instability protein (DUF1767)
    Primary source
    TAIR:AT5G63540
    Locus tag
    AT5G63540
    See related
    Araport:AT5G63540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRMI1; BLAP75; MLE2.17; MLE2_17; RECQ MEDIATED INSTABILITY 1
    Summary
    Encodes RMI1. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.
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    Genomic context

    See RMI1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (25440783..25444471, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene farnesylated protein 3 Neighboring gene ncRNA Neighboring gene DEK domain-containing chromatin associated protein Neighboring gene HXXXD-type acyl-transferase family protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    NM_001126014.1
    NM_125749.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    recQ-mediated instability protein (DUF1767)
    NP_001119486.1
    • RECQ MEDIATED INSTABILITY 1 (RMI1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: meiosis, double-strand break repair via homologous recombination; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, inflorescence meristem, sperm cell, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G19950.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_201159.2
    • RECQ MEDIATED INSTABILITY 1 (RMI1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G19950.3); Has 297 Blast hits to 286 proteins in 91 species: Archae - 0; Bacteria - 10; Metazoa - 136; Fungi - 20; Plants - 89; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25440783..25444471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125749.5NP_201159.2  recQ-mediated instability protein (DUF1767) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201159.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5XUX6, Q9FMU8
      UniProtKB/TrEMBL
      A0A5S9YGM8
      Conserved Domains (3) summary
      pfam08585
      Location:104271
      RMI1_N; RecQ mediated genome instability protein
      pfam16099
      Location:483622
      RMI1_C; Recq-mediated genome instability protein 1, C-terminal OB-fold
      cl19731
      Location:288466
      SipA; Salmonella invasion protein A
    2. NM_001126014.1NP_001119486.1  recQ-mediated instability protein (DUF1767) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119486.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UG87, A0A654GDN1, A0A7G2FII9, B3H7H7
      Conserved Domains (3) summary
      pfam08585
      Location:104271
      RMI1_N; RecQ mediated genome instability protein
      pfam16099
      Location:516655
      RMI1_C; Recq-mediated genome instability protein 1, C-terminal OB-fold
      cl19731
      Location:321499
      SipA; Salmonella invasion protein A