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    TS1 terpene synthase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827268, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TS1
    Official Full Name
    terpene synthase 1
    Primary source
    TAIR:AT4G15870
    Locus tag
    AT4G15870
    See related
    Araport:AT4G15870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATTS1; DL3975C; FCAALL.405; terpene synthase 1
    Summary
    encodes a putative terpene synthase
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    Genomic context

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    See TS1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (9008372..9010947, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RNA helicase 1 Neighboring gene pseudo Neighboring gene Cysteine proteinases superfamily protein Neighboring gene kinesin motor protein-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure, organization and putative function of the genes identified within a 23.9-kb fragment from Arabidopsis thaliana chromosome IV. Aubourg S, et al. Gene, 1997 Oct 15. PMID 9358062
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_117679.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables terpene synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in diterpenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within terpene biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    terpene synthase 1
    NP_193322.2
    • terpene synthase 1 (TS1); FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: terpene biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT2G23230.1); Has 1681 Blast hits to 1659 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1677; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9008372..9010947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117679.2 → NP_193322.2  terpene synthase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193322.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22680, O23437, O23438, O23651
      UniProtKB/TrEMBL
      A0A5S9XST0
      Conserved Domains (1) summary
      cd00684
      Location:67 → 594
      Terpene_cyclase_plant_C1; Plant Terpene Cyclases, Class 1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O23651.1

    Gene LinkOut

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