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    TGFB2-AS1 TGFB2 antisense RNA 1 (head to head) [ Homo sapiens (human) ]

    Gene ID: 728463, updated on 10-Dec-2024

    Summary

    Official Symbol
    TGFB2-AS1provided by HGNC
    Official Full Name
    TGFB2 antisense RNA 1 (head to head)provided by HGNC
    Primary source
    HGNC:HGNC:50628
    See related
    AllianceGenome:HGNC:50628
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in lung (RPKM 1.2), prostate (RPKM 1.2) and 22 other tissues See more
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    Genomic context

    See TGFB2-AS1 in Genome Data Viewer
    Location:
    1q41
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (218344196..218345678, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (217578960..217580442, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (218517538..218519020, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2540 Neighboring gene ribosomal RNA processing 15 homolog Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1819 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2541 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:218520227-218520727 Neighboring gene ribosomal protein S26 pseudogene 17 Neighboring gene transforming growth factor beta 2 Neighboring gene TGFB2 overlapping transcript 1 Neighboring gene Sharpr-MPRA regulatory region 8131 Neighboring gene long intergenic non-protein coding RNA 2869

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_046268.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC096638

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      218344196..218345678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      217578960..217580442 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)