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    CXXC1P1 CXXC finger protein 1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 392459, updated on 10-Dec-2024

    Summary

    Official Symbol
    CXXC1P1provided by HGNC
    Official Full Name
    CXXC finger protein 1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:27864
    See related
    Ensembl:ENSG00000290641 AllianceGenome:HGNC:27864
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CXorf25; NCRNA00236
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See CXXC1P1 in Genome Data Viewer
    Location:
    Xp11.23
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (47707191..47736628)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (47117092..47146532)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (47566590..47596027)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene CRISPRi-FlowFISH-validated PLP2 regulatory element 2 Neighboring gene ETS transcription factor ELK1 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:47517923-47518426 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:47518427-47518928 Neighboring gene CRISPRi-validated cis-regulatory element chrX.881 Neighboring gene UXT antisense RNA 1 Neighboring gene ubiquitously expressed prefoldin like chaperone Neighboring gene SMS pseudogene 1 Neighboring gene zinc finger protein 585A pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29595 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29596 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29597 Neighboring gene zinc finger protein 484 pseudogene

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_028296.1 RefSeqGene

      Range
      5001..34438
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_033924.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK094108, AL009172
      Related
      ENST00000483225.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      47707191..47736628
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      47117092..47146532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)