U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Fbxw19 F-box and WD-40 domain protein 19 [ Mus musculus (house mouse) ]

    Gene ID: 235612, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fbxw19provided by MGI
    Official Full Name
    F-box and WD-40 domain protein 19provided by MGI
    Primary source
    MGI:MGI:3505706
    See related
    Ensembl:ENSMUSG00000074061 AllianceGenome:MGI:3505706
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    E330023O18
    Summary
    Predicted to be active in cytoplasm. Orthologous to human FBXW12 (F-box and WD repeat domain containing 12). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Fbxw19 in Genome Data Viewer
    Location:
    9 F2; 9 59.66 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (109307575..109324931, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109478507..109495863, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene F-box and WD-40 domain protein 22 Neighboring gene F-box and WD-40 domain protein 16 Neighboring gene STARR-seq mESC enhancer starr_25233 Neighboring gene STARR-seq mESC enhancer starr_25234 Neighboring gene F-box and WD-40 domain protein 23 Neighboring gene F-box and WD-40 domain protein 15

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    F-box and WD-40 domain protein 19

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177703.3NP_808371.1  F-box and WD-40 domain protein 19

      See identical proteins and their annotated locations for NP_808371.1

      Status: PROVISIONAL

      Source sequence(s)
      AK087808
      Consensus CDS
      CCDS23552.1
      UniProtKB/TrEMBL
      Q8C2W8
      Related
      ENSMUSP00000075918.5, ENSMUST00000076617.7
      Conserved Domains (1) summary
      pfam12937
      Location:548
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      109307575..109324931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011242961.1XP_011241263.1  F-box and WD-40 domain protein 19 isoform X1

      Conserved Domains (1) summary
      pfam12937
      Location:546
      F-box-like