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    Fam234a family with sequence similarity 234, member A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 360502, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Fam234aprovided by RGD
    Official Full Name
    family with sequence similarity 234, member Aprovided by RGD
    Primary source
    RGD:1311484
    See related
    EnsemblRapid:ENSRNOG00000067554 AllianceGenome:RGD:1311484
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Itfg3; RGD1311484
    Summary
    Predicted to be located in membrane. Predicted to be active in cell surface. Orthologous to human FAM234A (family with sequence similarity 234 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See Fam234a in Genome Data Viewer
    Location:
    10q12
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (15736741..15768043, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (15232267..15263529, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene Rho GDP dissociation inhibitor gamma Neighboring gene regulator of G-protein signaling 11 Neighboring gene uncharacterized LOC108352066 Neighboring gene small nucleolar RNA SNORA44 Neighboring gene LUC7-like Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins. Wollscheid B, et al. Nat Biotechnol, 2009 Apr. PMID 19349973, Free PMC Article
    2. Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS. Moser K, et al. J Proteome Res, 2006 Jan. PMID 16396499
    3. Quantitative proteomics identifies a Dab2/integrin module regulating cell migration. Teckchandani A, et al. J Cell Biol, 2009 Jul 13. PMID 19581412, Free PMC Article
    4. MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis. Buschow SI, et al. Immunol Cell Biol, 2010 Nov-Dec. PMID 20458337
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC93756

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein FAM234A
    Names
    integrin alpha FG-GAP repeat containing 3
    protein ITFG3
    protein ITFG3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009701.1 → NP_001009701.1  protein FAM234A

      See identical proteins and their annotated locations for NP_001009701.1

      Status: PROVISIONAL

      Source sequence(s)
      BC088404
      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6
      Related
      ENSRNOP00000097833.1, ENSRNOT00000120131.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      15736741..15768043 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039086281.2 → XP_038942209.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    2. XM_063269320.1 → XP_063125390.1  protein FAM234A isoform X2

      UniProtKB/TrEMBL
      A0A8I6AKT6

    3. XM_039086284.2 → XP_038942212.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    4. XM_039086282.2 → XP_038942210.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    5. XM_063269319.1 → XP_063125389.1  protein FAM234A isoform X2

      UniProtKB/TrEMBL
      A0A8I6AKT6

    6. XM_039086287.2 → XP_038942215.1  protein FAM234A isoform X2

      UniProtKB/TrEMBL
      A0A8I6AKT6

    7. XM_063269321.1 → XP_063125391.1  protein FAM234A isoform X2

      UniProtKB/TrEMBL
      A0A8I6AKT6

    8. XM_039086285.2 → XP_038942213.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    9. XM_063269317.1 → XP_063125387.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    10. XM_063269318.1 → XP_063125388.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    11. XM_063269316.1 → XP_063125386.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    12. XM_039086283.2 → XP_038942211.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6

    13. XM_039086286.2 → XP_038942214.1  protein FAM234A isoform X1

      UniProtKB/Swiss-Prot
      Q5M7W6
      UniProtKB/TrEMBL
      A0A8I6AKT6
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5M7W6.1 GenPept UniProtKB/Swiss-Prot:Q5M7W6

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