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    CG30416 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 246603, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG30416provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0050416
    Locus tag
    Dmel_CG30416
    See related
    AllianceGenome:FB:FBgn0050416
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT11052; CG9803; Dmel\CG30416
    Orthologs
    all
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    Genomic context

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    See CG30416 in Genome Data Viewer
    Location:
    59D6-59D6; 2-102 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23321481..23323399, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19209004..19210922, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Heterochromatin Protein 1L chromoshadow domain Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene testis-specifically expressed bromodomain containing protein-3 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    2. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG30416-PB
    CG30416-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23321481..23323399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166591.3 → NP_726306.3  uncharacterized protein Dmel_CG30416, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726306.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IHD9, Q8MLS4
      Conserved Domains (1) summary
      PRK14948
      Location:308 → 395
      PRK14948; DNA polymerase III subunits gamma and tau; Provisional

    2. NM_001299835.1 → NP_001286764.1  uncharacterized protein Dmel_CG30416, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286764.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LHA8
      Conserved Domains (2) summary
      PRK11910
      Location:359 → 443
      PRK11910; amidase; Provisional
      PTZ00395
      Location:309 → 377
      PTZ00395; Sec24-related protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LHA8 A0A0B4LHA8
    Q8MLS4 Q8MLS4

    Gene LinkOut

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