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    Rhoq ras homolog family member Q [ Mus musculus (house mouse) ]

    Gene ID: 104215, updated on 27-Nov-2024

    Summary

    Official Symbol
    Rhoqprovided by MGI
    Official Full Name
    ras homolog family member Qprovided by MGI
    Primary source
    MGI:MGI:1931553
    See related
    Ensembl:ENSMUSG00000024143 AllianceGenome:MGI:1931553
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arhq; Tc10; TC10A
    Summary
    Predicted to enable several functions, including GBD domain binding activity; GTP binding activity; and profilin binding activity. Involved in cellular response to insulin stimulus; cortical actin cytoskeleton organization; and negative regulation of protein localization to plasma membrane. Acts upstream of or within regulation of cell shape. Located in membrane raft. Is expressed in dentate gyrus subgranular zone; lower leg bone; and telencephalon. Orthologous to human RHOQ (ras homolog family member Q). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in subcutaneous fat pad adult (RPKM 5.0), limb E14.5 (RPKM 4.7) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Rhoq in Genome Data Viewer
    Location:
    17 E4; 17 56.9 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (87270539..87307497)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (86963111..87000069)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 247 Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit E2 Neighboring gene STARR-positive B cell enhancer ABC_E10976 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:87357353-87357462 Neighboring gene predicted gene, 57642 Neighboring gene STARR-positive B cell enhancer ABC_E1948 Neighboring gene STARR-positive B cell enhancer ABC_E1512 Neighboring gene predicted gene, 50012 Neighboring gene STARR-positive B cell enhancer ABC_E7564 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class F Neighboring gene STARR-positive B cell enhancer ABC_E493 Neighboring gene cysteine-rich PDZ-binding protein Neighboring gene predicted gene, 30421 Neighboring gene predicted gene, 24648

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (4)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GBD domain binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GBD domain binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTPase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables profilin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables profilin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in GTP metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in GTP metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within actin cytoskeleton organization TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in actin filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to insulin stimulus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cellular response to insulin stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cortical actin cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cortical actin cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cortical actin cytoskeleton organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in endocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in establishment of cell polarity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in insulin receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in insulin receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of D-glucose import IC
    Inferred by Curator
    more info
    PubMed 
    involved_in negative regulation of protein localization to plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of protein localization to plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of D-glucose import IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of D-glucose import ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of filopodium assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of filopodium assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of cell shape IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
     
    located_in actin filament ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane raft IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    rho-related GTP-binding protein RhoQ
    Names
    ras homolog gene family, member Q
    ras-like protein TC10
    ras-related GTP-binding protein TC10
    small GTPase Tc10

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145491.3NP_663466.2  rho-related GTP-binding protein RhoQ

      See identical proteins and their annotated locations for NP_663466.2

      Status: VALIDATED

      Source sequence(s)
      AC154492
      Consensus CDS
      CCDS29010.1
      UniProtKB/Swiss-Prot
      Q7TNC0, Q80VH4, Q8R527
      Related
      ENSMUSP00000024956.9, ENSMUST00000024956.15
      Conserved Domains (1) summary
      cd04135
      Location:10183
      Tc10; Rho GTPase TC10 (Tc10)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      87270539..87307497
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)