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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001297423.2 → NP_001284352.1  endosomal/lysosomal proton channel TMEM175 isoform 2
See identical proteins and their annotated locations for NP_001284352.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in its 5' UTR and uses a downstream start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2, 3, and 4 encode the same isoform.
- Source sequence(s)
-
BC047738, DA168151
- Consensus CDS
-
CCDS75087.1
- UniProtKB/TrEMBL
- A0A9K3Y7F1, D3DVN6, F6UWG6
- Related
-
ENST00000438836.6
- Conserved Domains (1) summary
-
- pfam06736
Location:178 → 274
- DUF1211; Protein of unknown function (DUF1211)
-
NM_001297424.2 → NP_001284353.1  endosomal/lysosomal proton channel TMEM175 isoform 2
See identical proteins and their annotated locations for NP_001284353.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in its 5' UTR and uses a downstream start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2, 3, and 4 encode the same isoform.
- Source sequence(s)
-
BC047738, BI819231
- Consensus CDS
-
CCDS75087.1
- UniProtKB/TrEMBL
- A0A9K3Y7F1, D3DVN6, F6UWG6
- Related
- ENSP00000423669.1, ENST00000508204.5
- Conserved Domains (1) summary
-
- pfam06736
Location:178 → 274
- DUF1211; Protein of unknown function (DUF1211)
-
NM_001297425.2 → NP_001284354.1  endosomal/lysosomal proton channel TMEM175 isoform 2
See identical proteins and their annotated locations for NP_001284354.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in its 5' UTR and uses a downstream start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2, 3, and 4 encode the same isoform.
- Source sequence(s)
-
BC047738, CB992640
- Consensus CDS
-
CCDS75087.1
- UniProtKB/TrEMBL
- A0A9K3Y7F1, D3DVN6, F6UWG6
- Conserved Domains (1) summary
-
- pfam06736
Location:178 → 274
- DUF1211; Protein of unknown function (DUF1211)
-
NM_001297426.2 → NP_001284355.1  endosomal/lysosomal proton channel TMEM175 isoform 3
See identical proteins and their annotated locations for NP_001284355.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in its 5' UTR and uses a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1. Variants 5, 6, and 7 encode the same isoform.
- Source sequence(s)
-
AL834199, BC047738, DA168151
- Consensus CDS
-
CCDS75088.1
- UniProtKB/Swiss-Prot
-
Q9BSA9
- Related
- ENSP00000485461.1, ENST00000622959.3
- Conserved Domains (1) summary
-
- pfam06736
Location:144 → 240
- DUF1211; Protein of unknown function (DUF1211)
-
NM_001297427.2 → NP_001284356.1  endosomal/lysosomal proton channel TMEM175 isoform 3
See identical proteins and their annotated locations for NP_001284356.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in its 5' UTR and uses a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1. Variants 5, 6, and 7 encode the same isoform.
- Source sequence(s)
-
BC047738, BC063488, DA168151
- Consensus CDS
-
CCDS75088.1
- UniProtKB/Swiss-Prot
-
Q9BSA9
- Conserved Domains (1) summary
-
- pfam06736
Location:144 → 240
- DUF1211; Protein of unknown function (DUF1211)
-
NM_001297428.2 → NP_001284357.1  endosomal/lysosomal proton channel TMEM175 isoform 3
See identical proteins and their annotated locations for NP_001284357.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in its 5' UTR and uses a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1. Variants 5, 6, and 7 encode the same isoform.
- Source sequence(s)
-
BC047738, CF242841, DA168151
- Consensus CDS
-
CCDS75088.1
- UniProtKB/Swiss-Prot
-
Q9BSA9
- Related
- ENSP00000427039.1, ENST00000515740.5
- Conserved Domains (1) summary
-
- pfam06736
Location:144 → 240
- DUF1211; Protein of unknown function (DUF1211)
-
NM_032326.4 → NP_115702.1  endosomal/lysosomal proton channel TMEM175 isoform 1
See identical proteins and their annotated locations for NP_115702.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
BC005158, BC047738, DA168151
- Consensus CDS
-
CCDS3341.1
- UniProtKB/Swiss-Prot
- D3DVN4, Q8ND13, Q9BSA9
- Related
- ENSP00000264771.4, ENST00000264771.9
- Conserved Domains (1) summary
-
- pfam06736
Location:260 → 356
- DUF1211; Protein of unknown function (DUF1211)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12Â Reference GRCh38.p14 Primary Assembly
- Range
-
932460..958656
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017008701.2 → XP_016864190.1  endosomal/lysosomal proton channel TMEM175 isoform X1
- UniProtKB/Swiss-Prot
- D3DVN4, Q8ND13, Q9BSA9
- Conserved Domains (1) summary
-
- pfam06736
Location:260 → 356
- DUF1211; Protein of unknown function (DUF1211)
-
XM_005272301.3 → XP_005272358.1  endosomal/lysosomal proton channel TMEM175 isoform X2
- Conserved Domains (1) summary
-
- pfam06736
Location:232 → 328
- DUF1211; Protein of unknown function (DUF1211)
-
XM_047416295.1 → XP_047272251.1  endosomal/lysosomal proton channel TMEM175 isoform X4
-
XM_005272307.6 → XP_005272364.1  endosomal/lysosomal proton channel TMEM175 isoform X6
- Conserved Domains (2) summary
-
- pfam06736
Location:35 → 124
- DUF1211; Protein of unknown function (DUF1211)
- cl01421
Location:260 → 280
- DUF1211; Protein of unknown function (DUF1211)
-
XM_047416293.1 → XP_047272249.1  endosomal/lysosomal proton channel TMEM175 isoform X3
- UniProtKB/TrEMBL
- A0A9K3Y7F1, D3DVN6, F6UWG6
-
XM_047416294.1 → XP_047272250.1  endosomal/lysosomal proton channel TMEM175 isoform X3
- UniProtKB/TrEMBL
- A0A9K3Y7F1, D3DVN6, F6UWG6
-
XM_047416296.1 → XP_047272252.1  endosomal/lysosomal proton channel TMEM175 isoform X5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1Â Alternate T2T-CHM13v2.0
- Range
-
930532..956764
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054351041.1 → XP_054207016.1  endosomal/lysosomal proton channel TMEM175 isoform X1
- UniProtKB/Swiss-Prot
- D3DVN4, Q8ND13, Q9BSA9
-
XM_054351042.1 → XP_054207017.1  endosomal/lysosomal proton channel TMEM175 isoform X2
-
XM_054351045.1 → XP_054207020.1  endosomal/lysosomal proton channel TMEM175 isoform X4
-
XM_054351047.1 → XP_054207022.1  endosomal/lysosomal proton channel TMEM175 isoform X6
-
XM_054351043.1 → XP_054207018.1  endosomal/lysosomal proton channel TMEM175 isoform X3
- UniProtKB/TrEMBL
- A0A9K3Y7F1, D3DVN6, F6UWG6
-
XM_054351044.1 → XP_054207019.1  endosomal/lysosomal proton channel TMEM175 isoform X3
- UniProtKB/TrEMBL
- A0A9K3Y7F1, D3DVN6, F6UWG6
-
XM_054351046.1 → XP_054207021.1  endosomal/lysosomal proton channel TMEM175 isoform X5