U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    CRHR1 corticotropin releasing hormone receptor 1 [ Homo sapiens (human) ]

    Gene ID: 1394, updated on 10-Dec-2024

    Summary

    Official Symbol
    CRHR1provided by HGNC
    Official Full Name
    corticotropin releasing hormone receptor 1provided by HGNC
    Primary source
    HGNC:HGNC:2357
    See related
    Ensembl:ENSG00000120088 MIM:122561; AllianceGenome:HGNC:2357
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CRF1; CRHR; CRF-R; CRFR1; CRF-R1; CRFR-1; CRH-R1; CRHR1L; CRF-R-1; CRH-R-1
    Summary
    This gene encodes a G-protein coupled receptor that binds neuropeptides of the corticotropin releasing hormone family that are major regulators of the hypothalamic-pituitary-adrenal pathway. The encoded protein is essential for the activation of signal transduction pathways that regulate diverse physiological processes including stress, reproduction, immune response and obesity. Alternative splicing results in multiple transcript variants. Naturally-occurring readthrough transcription between this gene and upstream GeneID:147081 results in transcripts that encode isoforms that share similarity with the products of this gene. [provided by RefSeq, Aug 2016]
    Expression
    Biased expression in brain (RPKM 2.0), endometrium (RPKM 0.5) and 3 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CRHR1 in Genome Data Viewer
    Location:
    17q21.31
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (45784320..45835828)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (46645948..46697461)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (43861686..43913194)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene LINC02210-CRHR1 readthrough Neighboring gene uncharacterized LOC105371802 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr17:43782244-43783443 Neighboring gene Sharpr-MPRA regulatory region 9533 Neighboring gene uncharacterized LOC107985028 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr17:43822876-43823542 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr17:43823543-43824208 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43828999-43829910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43835142-43835642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43840160-43840660 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr17:43848965-43849573 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43862413-43862913 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43869433-43869933 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43883739-43884240 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43884241-43884740 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43890849-43891705 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43900915-43901416 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:43917814-43918023 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43922169-43923153 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43923154-43924137 Neighboring gene MAPT antisense RNA 1 Neighboring gene signal peptide peptidase like 2C Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43971863-43972748 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43972749-43973634 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:43974521-43975405 Neighboring gene MAPT intronic transcript 1 Neighboring gene microtubule associated protein tau

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    BioGRID CRISPR Screen Phenotypes (20 hits/1251 screens)

    Copy number response

    Description
    Copy number response
    Haploinsufficency

    No evidence available (Last evaluated 2012-07-06)

    ClinGen Genome Curation Page
    Triplosensitivity

    No evidence available (Last evaluated 2012-07-06)

    ClinGen Genome Curation Page

    EBI GWAS Catalog

    Description
    Common variants at 12q15 and 12q24 are associated with infant head circumference.
    EBI GWAS Catalog
    Common variants at 6q22 and 17q21 are associated with intracranial volume.
    EBI GWAS Catalog
    Genetic variants associated with idiopathic pulmonary fibrosis susceptibility and mortality: a genome-wide association study.
    EBI GWAS Catalog
    Genome-wide association study reveals genetic risk underlying Parkinson's disease.
    EBI GWAS Catalog
    Imputation of sequence variants for identification of genetic risks for Parkinson's disease: a meta-analysis of genome-wide association studies.
    EBI GWAS Catalog
    Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
    EBI GWAS Catalog

    Pathways from PubChem

    Interactions

    General gene information

    Readthrough LINC02210-CRHR1

    Readthrough gene: LINC02210-CRHR1, Included gene: LINC02210

    Clone Names

    • FLJ42904

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in activation of adenylate cyclase activity PubMed 
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway  
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway PubMed 
    involved_in adrenal gland development  
    involved_in behavioral response to ethanol  
    involved_in cell surface receptor signaling pathway  
    involved_in cellular response to corticotropin-releasing hormone stimulus PubMed 
    involved_in corticotropin secretion  
    involved_in exploration behavior  
    involved_in fear response  
    involved_in female pregnancy PubMed 
    involved_in general adaptation syndrome, behavioral process  
    involved_in hormone-mediated signaling pathway  
    involved_in immune response PubMed 
    involved_in negative regulation of voltage-gated calcium channel activity PubMed 
    involved_in parturition PubMed 
    involved_in regulation of corticosterone secretion  
    Component Evidence Code Pubs
    located_in endosome  
    located_in glutamatergic synapse  
    located_in membrane PubMed 
    is_active_in neuron projection  
    is_active_in plasma membrane  
    located_in plasma membrane PubMed 
    located_in plasma membrane  
    located_in postsynaptic density membrane  

    General protein information

    Preferred Names
    corticotropin-releasing factor receptor 1
    Names
    corticotropin-releasing factor type 1 receptor
    seven transmembrane helix receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_009902.2 RefSeqGene

      Range
      5002..56510
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001145146.2 → NP_001138618.1  corticotropin-releasing factor receptor 1 isoform 1 precursor

      See identical proteins and their annotated locations for NP_001138618.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1b, also known as CRH-R1beta), represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AF488558, CK299669, L23333, X72304
      Consensus CDS
      CCDS45712.1
      UniProtKB/TrEMBL
      A0A0A0MQZ1
      Related
      ENSP00000381333.3, ENST00000398285.7
      Conserved Domains (2) summary
      smart00008
      Location:40 → 111
      HormR; Domain present in hormone receptors
      pfam00002
      Location:116 → 388
      7tm_2; 7 transmembrane receptor (Secretin family)
    2. NM_001145147.2 → NP_001138619.1  corticotropin-releasing factor receptor 1 isoform 3 precursor

      See identical proteins and their annotated locations for NP_001138619.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1c, also known as CRH-R1c), lacks an alternate in-frame exon in both the 5' and central coding regions, compared to variant 1b. The encoded isoform (3) is shorter than isoform 1.
      Source sequence(s)
      AF488558, CK299669, U16273, X72304
      Consensus CDS
      CCDS45714.1
      UniProtKB/TrEMBL
      A0A0A0MQZ1, G3CIS4
      Related
      ENSP00000344068.5, ENST00000352855.9
      Conserved Domains (2) summary
      pfam00002
      Location:76 → 319
      7tm_2; 7 transmembrane receptor (Secretin family)
      cl02422
      Location:28 → 71
      HRM; Hormone receptor domain
    3. NM_001145148.2 → NP_001138620.1  corticotropin-releasing factor receptor 1 isoform 4 precursor

      See identical proteins and their annotated locations for NP_001138620.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1d, also known as CRH-R1d), lacks an alternate in-frame exon in both the central and 3' coding regions, compared to variant. The encoded isoform (4) is shorter than isoform 1.
      Source sequence(s)
      AF180301, AF488558, CK299669, X72304
      Consensus CDS
      CCDS45713.1
      UniProtKB/TrEMBL
      A0A0A0MQZ1, G3CIS4
      Related
      ENSP00000462016.1, ENST00000577353.5
      Conserved Domains (2) summary
      smart00008
      Location:40 → 111
      HormR; Domain present in hormone receptors
      pfam00002
      Location:116 → 355
      7tm_2; 7 transmembrane receptor (Secretin family)
    4. NM_001303018.2 → NP_001289947.1  corticotropin-releasing factor receptor 1 isoform 1e-B

      See identical proteins and their annotated locations for NP_001289947.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1e, also known as CRH-R1e) lacks three alternate exons, and it thus differs in its 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1b. The encoded isoform (1e-B) is shorter at the N-terminus, compared to isoform 1.
      Source sequence(s)
      FJ200483, HM852949, HY150162
      Conserved Domains (2) summary
      cd14964
      Location:14 → 40
      7tm_GPCRs; TM helix 3 [structural motif]
      cl28897
      Location:1 → 205
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    5. NM_001303020.2 → NP_001289949.1  corticotropin-releasing factor receptor 1 isoform 1i-B

      See identical proteins and their annotated locations for NP_001289949.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1i) lacks two alternate exons, and it thus differs in its 5' UTR and initiates translation at an alternate start codon, compared to variant 1b. The encoded isoform (1i-B) is shorter and has a distinct N-terminus, compared to isoform 1.
      Source sequence(s)
      EU012435, HM852949, HY150162
      UniProtKB/TrEMBL
      B3TIK8
      Conserved Domains (1) summary
      cd15445
      Location:15 → 279
      7tmB1_CRF-R1; corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors
    6. NM_004382.5 → NP_004373.2  corticotropin-releasing factor receptor 1 isoform 2 precursor

      See identical proteins and their annotated locations for NP_004373.2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1a, also known as CRHR1alpha), lacks an alternate in-frame exon in the central coding region, compared to variant 1b, resulting in an isoform (2) that is shorter than isoform 1.
      Source sequence(s)
      CK299669, X72304
      Consensus CDS
      CCDS42350.1
      UniProtKB/Swiss-Prot
      B4DIE9, P34998, Q13008, Q4QRJ1, Q9UK64
      UniProtKB/TrEMBL
      A0A0A0MQZ1, G3CIS4
      Related
      ENSP00000326060.6, ENST00000314537.10
      Conserved Domains (2) summary
      smart00008
      Location:40 → 111
      HormR; Domain present in hormone receptors
      pfam00002
      Location:116 → 359
      7tm_2; 7 transmembrane receptor (Secretin family)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      45784320..45835828
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_167251.2 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      952322..1003850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_2

    Genomic

    1. NT_187663.1 Reference GRCh38.p14 ALT_REF_LOCI_2

      Range
      486431..537950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      46645948..46697461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    External link. Please review our privacy policy.