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    CG5611 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43318, updated on 28-Oct-2024

    Summary

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    Official Symbol
    CG5611provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039531
    Locus tag
    Dmel_CG5611
    See related
    AllianceGenome:FB:FBgn0039531
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5611
    Orthologs
    all
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    Genomic context

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    See CG5611 in Genome Data Viewer
    Location:
    98A12-98A13; 3-94 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27634625..27636060, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (23460347..23461782, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene distracted Neighboring gene tusp Neighboring gene uncharacterized protein Neighboring gene Mig-2-like Neighboring gene mir-1001 stem loop Neighboring gene tau

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tubby domain superfamily protein is required for the formation of the 7S SNARE complex in Drosophila. Yoon EJ, et al. Biochem Biophys Res Commun, 2017 Jan 22. PMID 27888110
    2. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article
    3. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
    4. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5611-PA
    CG5611-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      27634625..27636060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001276087.2 → NP_001263016.2  uncharacterized protein Dmel_CG5611, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001263016.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VB17
      Conserved Domains (1) summary
      cl23717
      Location:39 → 256
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

    2. NM_143317.3 → NP_651574.1  uncharacterized protein Dmel_CG5611, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651574.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VB17
      Related
      FBpp0084569
      Conserved Domains (1) summary
      cl23717
      Location:39 → 256
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VB17 Q9VB17

    Gene LinkOut

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