U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tmem213 transmembrane protein 213 [ Mus musculus (house mouse) ]

    Gene ID: 77522, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem213provided by MGI
    Official Full Name
    transmembrane protein 213provided by MGI
    Primary source
    MGI:MGI:1924772
    See related
    Ensembl:ENSMUSG00000029829 AllianceGenome:MGI:1924772
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D630002J15Rik
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM213 (transmembrane protein 213). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward kidney adult (RPKM 89.6) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem213 in Genome Data Viewer
    Location:
    6 B1; 6 17.64 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (38086288..38092741)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (38109353..38115806)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene SV2 related protein homolog (rat)-like Neighboring gene predicted gene, 33494 Neighboring gene ATPase, H+ transporting, lysosomal V0 subunit A4 Neighboring gene predicted gene, 57763 Neighboring gene RIKEN cDNA D630045J12 gene Neighboring gene predicted gene, 23231 Neighboring gene predicted gene, 52858

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029921.1NP_084197.1  transmembrane protein 213

      See identical proteins and their annotated locations for NP_084197.1

      Status: VALIDATED

      Source sequence(s)
      AK021320
      Consensus CDS
      CCDS51748.1
      UniProtKB/Swiss-Prot
      Q08EA8, Q9D1U9
      UniProtKB/TrEMBL
      A0A0R4J0C3
      Related
      ENSMUSP00000031851.4, ENSMUST00000031851.5
      Conserved Domains (1) summary
      pfam15192
      Location:51127
      TMEM213; TMEM213 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      38086288..38092741
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)