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    TRIM21 tripartite motif containing 21 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717826, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRIM21provided by VGNC
    Official Full Name
    tripartite motif containing 21provided by VGNC
    Primary source
    VGNC:VGNC:78556
    See related
    Ensembl:ENSMMUG00000004974
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRIM21 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (64192512..64201202)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (63151646..63160336)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 52K2-like Neighboring gene putative olfactory receptor 52P1 Neighboring gene olfactory receptor 52B4-like Neighboring gene olfactory receptor 52B4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TRIM21
    NP_001244974.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258045.1 → NP_001244974.1  E3 ubiquitin-protein ligase TRIM21

      See identical proteins and their annotated locations for NP_001244974.1

      Status: PROVISIONAL

      Source sequence(s)
      JU476938
      UniProtKB/TrEMBL
      F6ZU58, F7C1A0
      Related
      ENSMMUP00000006591.2, ENSMMUT00000007012.4
      Conserved Domains (4) summary
      TIGR00618
      Location:67 → 237
      sbcc; exonuclease SbcC
      cd12900
      Location:287 → 465
      SPRY_PRY_TRIM21; PRY/SPRY domain in tripartite motif-binding protein 21 (TRIM21) also known as 52kD Ribonucleoprotein Autoantigen (Ro52)
      cd16596
      Location:12 → 55
      RING-HC_TRIM21_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein TRIM21 and similar proteins
      cd19772
      Location:90 → 129
      Bbox2_TRIM21_C-IV; B-box-type 2 zinc finger found in tripartite motif-containing protein 21 (TRIM21) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      64192512..64201202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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