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    COL14A1 collagen type XIV alpha 1 chain [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702878, updated on 17-Aug-2024

    Summary

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    Official Symbol
    COL14A1provided by VGNC
    Official Full Name
    collagen type XIV alpha 1 chainprovided by VGNC
    Primary source
    VGNC:VGNC:71292
    See related
    Ensembl:ENSMMUG00000002595
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See COL14A1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    49
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (120403239..120648324)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (119328009..119579675)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680435 Neighboring gene hsc70-interacting protein pseudogene Neighboring gene mitochondrial ribosomal protein L13 Neighboring gene MDM2 binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in interstitial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    collagen alpha-1(XIV) chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      120403239..120648324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145924.2 → XP_015001410.2  collagen alpha-1(XIV) chain isoform X1

      UniProtKB/TrEMBL
      A0A5S6RAS2, A0A8J8YCD9, F7HQD9, G7N011
      Related
      ENSMMUP00000003490.4, ENSMMUT00000003696.4
      Conserved Domains (6) summary
      pfam01391
      Location:1480 → 1553
      Collagen; Collagen triple helix repeat (20 copies)
      smart00060
      Location:447 → 516
      FN3; Fibronectin type 3 domain
      smart00210
      Location:1229 → 1424
      TSPN; Thrombospondin N-terminal -like domains
      cd00063
      Location:536 → 621
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd01482
      Location:1031 → 1195
      vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...
      pfam00041
      Location:830 → 908
      fn3; Fibronectin type III domain

    2. XM_015145925.2 → XP_015001411.2  collagen alpha-1(XIV) chain isoform X2

      Conserved Domains (6) summary
      pfam01391
      Location:1477 → 1550
      Collagen; Collagen triple helix repeat (20 copies)
      smart00060
      Location:447 → 516
      FN3; Fibronectin type 3 domain
      smart00210
      Location:1226 → 1421
      TSPN; Thrombospondin N-terminal -like domains
      cd00063
      Location:536 → 621
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd01482
      Location:1028 → 1192
      vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...
      pfam00041
      Location:827 → 905
      fn3; Fibronectin type III domain

    3. XM_015145926.2 → XP_015001412.2  collagen alpha-1(XIV) chain isoform X3

      Conserved Domains (6) summary
      pfam01391
      Location:1480 → 1553
      Collagen; Collagen triple helix repeat (20 copies)
      smart00060
      Location:447 → 516
      FN3; Fibronectin type 3 domain
      smart00210
      Location:1229 → 1424
      TSPN; Thrombospondin N-terminal -like domains
      cd00063
      Location:536 → 621
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd01482
      Location:1031 → 1195
      vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...
      pfam00041
      Location:830 → 908
      fn3; Fibronectin type III domain
    Nucleotide Protein
    Heading Accession and Version

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