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    SCG2 secretogranin II [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706499, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SCG2provided by VGNC
    Official Full Name
    secretogranin IIprovided by VGNC
    Primary source
    VGNC:VGNC:76977
    See related
    Ensembl:ENSMMUG00000018918
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See SCG2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (111035015..111040527, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (105850748..105856260, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene interferon-induced transmembrane protein 3 pseudogene Neighboring gene 60S ribosomal protein L39 pseudogene Neighboring gene uncharacterized LOC106992753 Neighboring gene uncharacterized LOC114671535

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    secretogranin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194420.2 → NP_001181349.2  secretogranin-2 precursor

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000079
      UniProtKB/TrEMBL
      F6ZTY9, G7N918, H9FZL9
      Related
      ENSMMUP00000024891.3, ENSMMUT00000026597.4
      Conserved Domains (1) summary
      pfam01271
      Location:27 → 614
      Granin; Granin (chromogranin or secretogranin)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      111035015..111040527 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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