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    MYOD1 myogenic differentiation 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696222, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MYOD1provided by VGNC
    Official Full Name
    myogenic differentiation 1provided by VGNC
    Primary source
    VGNC:VGNC:75122
    Locus tag
    EGK_06448
    See related
    Ensembl:ENSMMUG00000006400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MYOD1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (47914251..47916888, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (48681671..48684257, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene secretion regulating guanine nucleotide exchange factor Neighboring gene uncharacterized LOC114672315 Neighboring gene potassium voltage-gated channel subfamily C member 1 Neighboring gene otogelin Neighboring gene USH1 protein network component harmonin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in muscle organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of myoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myoblast determination protein 1
    Names
    Myogenic factor 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      47914251..47916888 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114759.2 → XP_014970245.1  myoblast determination protein 1

      UniProtKB/TrEMBL
      A0A8J8Y3D7, F7GWN8, G7NDT9
      Related
      ENSMMUP00000008443.2, ENSMMUT00000008979.4
      Conserved Domains (3) summary
      smart00520
      Location:19 → 114
      BASIC; Basic domain in HLH proteins of MYOD family
      pfam00010
      Location:110 → 161
      HLH; Helix-loop-helix DNA-binding domain
      pfam12232
      Location:191 → 259
      Myf5; Myogenic determination factor 5
    Nucleotide Protein
    Heading Accession and Version

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