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    KLF5 KLF transcription factor 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694320, updated on 5-Mar-2024

    Summary

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    Gene symbol
    KLF5
    Gene description
    KLF transcription factor 5
    See related
    Ensembl:ENSMMUG00000002533
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KLF5 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (54847068..54870052)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (54200673..54223702)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene progesterone immunomodulatory binding factor 1 Neighboring gene uncharacterized LOC106994306 Neighboring gene 26S proteasome non-ATPase regulatory subunit 10 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Krueppel-like factor 5
    Names
    Kruppel like factor 5
    krueppel-like factor 5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      54847068..54870052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121182.2 → XP_014976668.1  Krueppel-like factor 5 isoform X2

      UniProtKB/TrEMBL
      G7NJF2
      Conserved Domains (5) summary
      COG5048
      Location:268 → 342
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:287 → 306
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:342 → 364
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:328 → 353
      zf-H2C2_2; Zinc-finger double domain
      cd21579
      Location:1 → 279
      KLF5_N; N-terminal domain of Kruppel-like factor 5

    2. XM_002808151.3 → XP_002808197.2  Krueppel-like factor 5 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QBL7, G7NJF2
      Related
      ENSMMUP00000045436.2, ENSMMUT00000076988.2
      Conserved Domains (4) summary
      COG5048
      Location:155 → 451
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:378 → 397
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:433 → 455
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:419 → 444
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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