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    PDLIM4 PDZ and LIM domain 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707372, updated on 17-Aug-2024

    Summary

    Official Symbol
    PDLIM4provided by VGNC
    Official Full Name
    PDZ and LIM domain 4provided by VGNC
    Primary source
    VGNC:VGNC:75809
    See related
    Ensembl:ENSMMUG00000009298
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See PDLIM4 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (129709502..129724410)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (129950014..129964788)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene colony stimulating factor 2 Neighboring gene prolyl 4-hydroxylase subunit alpha 2 Neighboring gene solute carrier family 22 member 4 Neighboring gene uncharacterized LOC106998941 Neighboring gene solute carrier family 22 member 5

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables muscle alpha-actinin binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in heart development IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in muscle structure development IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of filamentous actin IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    PDZ and LIM domain protein 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257803.1NP_001244732.1  PDZ and LIM domain protein 4

      See identical proteins and their annotated locations for NP_001244732.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322593
      UniProtKB/TrEMBL
      F7H1G7, G7MTY5
      Related
      ENSMMUP00000012183.3, ENSMMUT00000012998.4
      Conserved Domains (3) summary
      cd09451
      Location:255307
      LIM_RIL; The LIM domain of RIL
      cd00992
      Location:280
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam15936
      Location:148220
      DUF4749; Domain of unknown function (DUF4749)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      129709502..129724410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140700.2XP_014996186.1  PDZ and LIM domain protein 4 isoform X1

      UniProtKB/TrEMBL
      F7H1G9
      Conserved Domains (2) summary
      cd00992
      Location:280
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      pfam15936
      Location:148229
      DUF4749; Domain of unknown function (DUF4749)