U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SLC9C1 solute carrier family 9 member C1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708000, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SLC9C1provided by VGNC
    Official Full Name
    solute carrier family 9 member C1provided by VGNC
    Primary source
    VGNC:VGNC:77806
    See related
    Ensembl:ENSMMUG00000016075
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    SLC9A10
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SLC9C1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (163895852..164032239)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (33208784..33347047, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene CD200 molecule Neighboring gene uncharacterized LOC114676431 Neighboring gene germinal center associated signaling and motility Neighboring gene chromosome 2 C3orf52 homolog Neighboring gene microRNA mir-567

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:proton antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sodium/hydrogen exchanger 10
    Names
    solute carrier family 9, member 10

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      163895852..164032239
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015129854.2 → XP_014985340.2  sodium/hydrogen exchanger 10 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QWL3, F7GPF1
      Related
      ENSMMUP00000052443.2, ENSMMUT00000077868.2
      Conserved Domains (3) summary
      cd00038
      Location:897 → 1018
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:633 → 746
      Ion_trans; Ion transport protein
      cl01133
      Location:39 → 440
      Na_H_Exchanger; Sodium/hydrogen exchanger family

    2. XM_015129858.2 → XP_014985344.2  sodium/hydrogen exchanger 10 isoform X3

      UniProtKB/TrEMBL
      F6XSU5
      Related
      ENSMMUP00000040035.3, ENSMMUT00000047004.3
      Conserved Domains (3) summary
      cd00038
      Location:897 → 993
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:633 → 746
      Ion_trans; Ion transport protein
      cl01133
      Location:39 → 440
      Na_H_Exchanger; Sodium/hydrogen exchanger family

    3. XM_015129857.2 → XP_014985343.2  sodium/hydrogen exchanger 10 isoform X2

      UniProtKB/TrEMBL
      F6XSS5
      Related
      ENSMMUP00000040036.3, ENSMMUT00000047005.3
      Conserved Domains (3) summary
      pfam00520
      Location:633 → 746
      Ion_trans; Ion transport protein
      cl00047
      Location:929 → 985
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      cl01133
      Location:39 → 440
      Na_H_Exchanger; Sodium/hydrogen exchanger family

    4. XM_015129859.2 → XP_014985345.2  sodium/hydrogen exchanger 10 isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZMH4
      Related
      ENSMMUP00000066822.1, ENSMMUT00000098727.1
      Conserved Domains (3) summary
      cd00038
      Location:843 → 964
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:579 → 692
      Ion_trans; Ion transport protein
      cl01133
      Location:39 → 386
      Na_H_Exchanger; Sodium/hydrogen exchanger family

    5. XM_015129855.2 → XP_014985341.2  sodium/hydrogen exchanger 10 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QWL3, F7GPF1
      Conserved Domains (3) summary
      cd00038
      Location:897 → 1018
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:633 → 746
      Ion_trans; Ion transport protein
      cl01133
      Location:39 → 440
      Na_H_Exchanger; Sodium/hydrogen exchanger family

    6. XM_015129862.2 → XP_014985348.1  sodium/hydrogen exchanger 10 isoform X5

      UniProtKB/TrEMBL
      F7GPF1
      Conserved Domains (4) summary
      COG0664
      Location:723 → 864
      Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
      cd00038
      Location:725 → 846
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam00520
      Location:492 → 574
      Ion_trans; Ion transport protein
      cl01133
      Location:5 → 268
      Na_H_Exchanger; Sodium/hydrogen exchanger family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials