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    LOC722130 interferon-induced protein with tetratricopeptide repeats 1B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 722130, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC722130
    Gene description
    interferon-induced protein with tetratricopeptide repeats 1B
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    IFIT1B
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    Genomic context

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    See LOC722130 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (89628576..89635732)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (84546881..84554048)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene interferon induced protein with tetratricopeptide repeats 3 Neighboring gene uncharacterized LOC114669998 Neighboring gene interferon induced protein with tetratricopeptide repeats 1 Neighboring gene interferon-induced protein with tetratricopeptide repeats 1B-like Neighboring gene interferon induced protein with tetratricopeptide repeats 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to virus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interferon-induced protein with tetratricopeptide repeats 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      89628576..89635732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015147650.2 → XP_015003136.2  interferon-induced protein with tetratricopeptide repeats 1B

      UniProtKB/TrEMBL
      H9F311
      Conserved Domains (2) summary
      TIGR02917
      Location:36 → 469
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:252 → 279
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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