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    SEC62 SEC62 homolog, preprotein translocation factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696989, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SEC62provided by VGNC
    Official Full Name
    SEC62 homolog, preprotein translocation factorprovided by VGNC
    Primary source
    VGNC:VGNC:84085
    See related
    Ensembl:ENSMMUG00000021899
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TLOC1
    Orthologs
    human mouse all
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    Genomic context

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    See SEC62 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (74901961..74931096)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (123844624..123874422, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene four and a half LIM domains protein 1 pseudogene Neighboring gene uncharacterized LOC106997009 Neighboring gene uncharacterized LOC114676294 Neighboring gene N-lysine methyltransferase KMT5A pseudogene Neighboring gene G protein-coupled receptor 160 Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in post-translational protein targeting to membrane, translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translocation protein SEC62
    Names
    translocation protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195502.1 → NP_001182431.1  translocation protein SEC62

      Status: VALIDATED

      Source sequence(s)
      CD767990, CN642061, CO725959, CO726423
      UniProtKB/TrEMBL
      A0A5F8AFD8
      Related
      ENSMMUP00000028838.2, ENSMMUT00000030813.4
      Conserved Domains (2) summary
      pfam03839
      Location:170 → 292
      Sec62; Translocation protein Sec62
      cl00583
      Location:276 → 378
      PhaG_MnhG_YufB; Na+/H+ antiporter subunit

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      74901961..74931096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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