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    RPAIN RPA interacting protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711897, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPAINprovided by VGNC
    Official Full Name
    RPA interacting proteinprovided by VGNC
    Primary source
    VGNC:VGNC:76854
    See related
    Ensembl:ENSMMUG00000010468
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C1QBP
    Orthologs
    human mouse all
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    Genomic context

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    See RPAIN in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (5212430..5226485)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (5327559..5341612)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene SLP adaptor and CSK interacting membrane protein Neighboring gene rabaptin, RAB GTPase binding effector protein 1 Neighboring gene nucleoporin 88 Neighboring gene U7 small nuclear RNA Neighboring gene complement C1q binding protein Neighboring gene DEAH-box helicase 33 Neighboring gene derlin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in PML body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RPA-interacting protein
    Names
    complement component 1 Q subcomponent-binding protein, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194178.2 → NP_001181107.2  RPA-interacting protein

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000155
      UniProtKB/TrEMBL
      F7BNJ7, H9YYF8
      Related
      ENSMMUP00000013717.3, ENSMMUT00000014643.4
      Conserved Domains (3) summary
      pfam14766
      Location:8 → 46
      RPA_interact_N; Replication protein A interacting N-terminal
      pfam14767
      Location:60 → 126
      RPA_interact_M; Replication protein A interacting middle
      pfam14768
      Location:137 → 217
      RPA_interact_C; Replication protein A interacting C-terminal

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      5212430..5226485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001101123.4 → XP_001101123.2  RPA-interacting protein isoform X1

      Conserved Domains (3) summary
      pfam14766
      Location:8 → 46
      RPA_interact_N; Replication protein A interacting N-terminal
      pfam14767
      Location:60 → 126
      RPA_interact_M; Replication protein A interacting middle
      pfam14768
      Location:137 → 165
      RPA_interact_C; Replication protein A interacting C-terminal

    2. XM_015118297.2 → XP_014973783.1  RPA-interacting protein isoform X2

      UniProtKB/TrEMBL
      F7EUH1, H9YYF7
      Conserved Domains (2) summary
      pfam14766
      Location:8 → 46
      RPA_interact_N; Replication protein A interacting N-terminal
      pfam14767
      Location:60 → 104
      RPA_interact_M; Replication protein A interacting middle

    3. XM_015118298.2 → XP_014973784.1  RPA-interacting protein isoform X3

      UniProtKB/TrEMBL
      F7EUE7
      Conserved Domains (2) summary
      pfam14766
      Location:8 → 46
      RPA_interact_N; Replication protein A interacting N-terminal
      pfam14767
      Location:60 → 104
      RPA_interact_M; Replication protein A interacting middle

    RNA

    1. XR_001440234.2 RNA Sequence

    2. XR_001440235.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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