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    RBM5 RNA binding motif protein 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704114, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RBM5provided by VGNC
    Official Full Name
    RNA binding motif protein 5provided by VGNC
    Primary source
    VGNC:VGNC:76682
    See related
    Ensembl:ENSMMUG00000004921
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RBM5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (106206507..106239020)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (92207206..92239838, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene MON1 homolog A, secretory trafficking associated Neighboring gene RNA binding motif protein 6 Neighboring gene semaphorin 3F Neighboring gene uncharacterized LOC114676350 Neighboring gene uncharacterized LOC114676351 Neighboring gene G protein subunit alpha transducin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261174.2 → NP_001248103.1  RNA-binding protein 5

      See identical proteins and their annotated locations for NP_001248103.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045862
      UniProtKB/TrEMBL
      A0A1D5Q9E1, F7CDY6, H9FNI2, I0FNA7
      Related
      ENSMMUP00000006530.4, ENSMMUT00000006944.4
      Conserved Domains (6) summary
      cd12752
      Location:93 → 179
      RRM1_RBM5; RNA recognition motif 1 in vertebrate RNA-binding protein 5 (RBM5)
      cd12755
      Location:229 → 314
      RRM2_RBM5; RNA recognition motif 2 in vertebrate RNA-binding protein 5 (RBM5)
      sd00025
      Location:185 → 204
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:181 → 210
      zf-RanBP; Zn-finger in Ran binding protein and others
      cd16168
      Location:455 → 510
      OCRE_RBM5; OCRE domain found in RNA-binding protein 5 (RBM5) and similar proteins
      pfam01585
      Location:743 → 787
      G-patch; G-patch domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      106206507..106239020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130789.2 → XP_014986275.1  RNA-binding protein 5 isoform X2

      UniProtKB/TrEMBL
      H9FNI2
      Conserved Domains (7) summary
      cd12752
      Location:93 → 179
      RRM1_RBM5; RNA recognition motif 1 in vertebrate RNA-binding protein 5 (RBM5)
      cd12755
      Location:229 → 314
      RRM2_RBM5; RNA recognition motif 2 in vertebrate RNA-binding protein 5 (RBM5)
      sd00025
      Location:185 → 204
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:181 → 210
      zf-RanBP; Zn-finger in Ran binding protein and others
      cd16074
      Location:425 → 431
      OCRE; OCRE repeat 4 [structural motif]
      cl23757
      Location:423 → 451
      OCRE; OCRE domain
      pfam01585
      Location:684 → 728
      G-patch; G-patch domain

    2. XM_015130788.2 → XP_014986274.1  RNA-binding protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q9E1, F7CDY6, H9FNI2, I0FNA7
      Related
      ENSMMUP00000044659.2, ENSMMUT00000066620.2
      Conserved Domains (6) summary
      cd12752
      Location:93 → 179
      RRM1_RBM5; RNA recognition motif 1 in vertebrate RNA-binding protein 5 (RBM5)
      cd12755
      Location:229 → 314
      RRM2_RBM5; RNA recognition motif 2 in vertebrate RNA-binding protein 5 (RBM5)
      sd00025
      Location:185 → 204
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:181 → 210
      zf-RanBP; Zn-finger in Ran binding protein and others
      cd16168
      Location:455 → 510
      OCRE_RBM5; OCRE domain found in RNA-binding protein 5 (RBM5) and similar proteins
      pfam01585
      Location:743 → 787
      G-patch; G-patch domain
    Nucleotide Protein
    Heading Accession and Version

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