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    STAB2 stabilin 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699023, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STAB2provided by VGNC
    Official Full Name
    stabilin 2provided by VGNC
    Primary source
    VGNC:VGNC:77957
    See related
    Ensembl:ENSMMUG00000006347
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See STAB2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    70
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (103300202..103468931)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (103454152..103626526)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene chromosome 11 C12orf42 homolog Neighboring gene glutaryl-CoA dehydrogenase, mitochondrial-like Neighboring gene high mobility group protein B1 pseudogene Neighboring gene U8 small nucleolar RNA Neighboring gene small nucleolar RNA U13 Neighboring gene 5'-nucleotidase domain containing 3 Neighboring gene tetratricopeptide repeat domain 41

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hyaluronic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stabilin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      103300202..103468931
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829815.1 → XP_028685648.1  stabilin-2 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A1P5
      Conserved Domains (4) summary
      smart00554
      Location:2401 → 2494
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      cd03515
      Location:2243 → 2335
      Link_domain_TSG_6_like; This is the extracellular link domain of the type found in human TSG-6. The link domain is a hyaluronan (HA)-binding domain. TSG-6 is the protein product of tumor necrosis factor-stimulated gene-6. TSG-6 is up-regulated in inflammatory lesions and in the ...
      pfam02469
      Location:1662 → 1771
      Fasciclin; Fasciclin domain
      pfam12947
      Location:1604 → 1640
      EGF_3; EGF domain

    2. XM_015152616.2 → XP_015008102.2  stabilin-2 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AVU3, F7HC30
      Related
      ENSMMUP00000008375.4, ENSMMUT00000008906.4
      Conserved Domains (4) summary
      smart00554
      Location:2355 → 2448
      FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
      cd03515
      Location:2197 → 2289
      Link_domain_TSG_6_like; This is the extracellular link domain of the type found in human TSG-6. The link domain is a hyaluronan (HA)-binding domain. TSG-6 is the protein product of tumor necrosis factor-stimulated gene-6. TSG-6 is up-regulated in inflammatory lesions and in the ...
      pfam02469
      Location:1616 → 1725
      Fasciclin; Fasciclin domain
      pfam12947
      Location:1558 → 1594
      EGF_3; EGF domain

    RNA

    1. XR_003720779.1 RNA Sequence

    2. XR_003720780.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials