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    SPATS2L spermatogenesis associated serine rich 2 like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699458, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPATS2Lprovided by VGNC
    Official Full Name
    spermatogenesis associated serine rich 2 likeprovided by VGNC
    Primary source
    VGNC:VGNC:77984
    See related
    Ensembl:ENSMMUG00000008101
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SPATS2L in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (87409438..87580581)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (81636860..81808492)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671527 Neighboring gene uncharacterized LOC114671389 Neighboring gene potassium channel tetramerization domain containing 18 Neighboring gene shugoshin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SPATS2-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260595.1 → NP_001247524.1  SPATS2-like protein

      See identical proteins and their annotated locations for NP_001247524.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046699
      UniProtKB/TrEMBL
      A0A1D5Q2L8, A0A1D5RCL4, G7N8L7
      Related
      ENSMMUP00000058056.2, ENSMMUT00000070907.2
      Conserved Domains (1) summary
      pfam07139
      Location:59 → 368
      DUF1387; Protein of unknown function (DUF1387)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      87409438..87580581
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110601.2 → XP_014966087.1  SPATS2-like protein isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q2L8, A0A1D5RCL4, G7N8L7
      Conserved Domains (1) summary
      pfam07139
      Location:59 → 368
      DUF1387; Protein of unknown function (DUF1387)

    2. XM_015110606.2 → XP_014966092.1  SPATS2-like protein isoform X5

      UniProtKB/TrEMBL
      A0A1D5QF35, F7HIW4, F7HIW8, G7N8L7
      Related
      ENSMMUP00000046654.2, ENSMMUT00000059685.2
      Conserved Domains (1) summary
      pfam07139
      Location:59 → 299
      DUF1387; Protein of unknown function (DUF1387)

    3. XM_028830444.1 → XP_028686277.1  SPATS2-like protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5RKG9, G7N8L7
      Related
      ENSMMUP00000060813.2, ENSMMUT00000078631.2
      Conserved Domains (1) summary
      pfam07139
      Location:98 → 407
      DUF1387; Protein of unknown function (DUF1387)

    4. XM_028830447.1 → XP_028686280.1  SPATS2-like protein isoform X4

      UniProtKB/TrEMBL
      G7N8L7
      Conserved Domains (1) summary
      pfam07139
      Location:12 → 313
      DUF1387; Protein of unknown function (DUF1387)

    5. XM_028830445.1 → XP_028686278.1  SPATS2-like protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5RKG9, G7N8L7
      Conserved Domains (1) summary
      pfam07139
      Location:98 → 407
      DUF1387; Protein of unknown function (DUF1387)

    6. XM_028830448.1 → XP_028686281.1  SPATS2-like protein isoform X4

      UniProtKB/TrEMBL
      G7N8L7
      Conserved Domains (1) summary
      pfam07139
      Location:12 → 313
      DUF1387; Protein of unknown function (DUF1387)

    7. XM_028830446.1 → XP_028686279.1  SPATS2-like protein isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q2L8, A0A1D5RCL4, G7N8L7
      Related
      ENSMMUP00000062083.1, ENSMMUT00000091346.1
      Conserved Domains (1) summary
      pfam07139
      Location:59 → 368
      DUF1387; Protein of unknown function (DUF1387)

    8. XM_028830449.1 → XP_028686282.1  SPATS2-like protein isoform X5

      UniProtKB/TrEMBL
      A0A1D5QF35, F7HIW4, F7HIW8, G7N8L7
      Related
      ENSMMUP00000010611.2, ENSMMUT00000011323.4
      Conserved Domains (1) summary
      pfam07139
      Location:59 → 299
      DUF1387; Protein of unknown function (DUF1387)

    9. XM_015110599.2 → XP_014966085.1  SPATS2-like protein isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q2U5, A0A5F7ZD85
      Related
      ENSMMUP00000062599.1, ENSMMUT00000084518.1
      Conserved Domains (1) summary
      pfam07139
      Location:84 → 392
      DUF1387; Protein of unknown function (DUF1387)

    10. XM_015110602.2 → XP_014966088.1  SPATS2-like protein isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q2L8, A0A1D5RCL4, G7N8L7
      Conserved Domains (1) summary
      pfam07139
      Location:59 → 368
      DUF1387; Protein of unknown function (DUF1387)

    11. XM_015110603.2 → XP_014966089.1  SPATS2-like protein isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q2L8, A0A1D5RCL4, G7N8L7
      Conserved Domains (1) summary
      pfam07139
      Location:59 → 368
      DUF1387; Protein of unknown function (DUF1387)
    Nucleotide Protein
    Heading Accession and Version

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