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    MARF1 meiosis regulator and mRNA stability factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713831, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MARF1provided by VGNC
    Official Full Name
    meiosis regulator and mRNA stability factor 1provided by VGNC
    Primary source
    VGNC:VGNC:74614
    Locus tag
    EGK_12533
    See related
    Ensembl:ENSMMUG00000018035
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    KIAA0430
    Orthologs
    human mouse all
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    Genomic context

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    See MARF1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (15175015..15223368, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (15397053..15445468, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene mpv17-like protein Neighboring gene bMERB domain containing 1 Neighboring gene uncharacterized LOC106994968 Neighboring gene microRNA mir-484 Neighboring gene nudE neurodevelopment protein 1 Neighboring gene myosin heavy chain 11 Neighboring gene cathepsin D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CCR4-NOT complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA nuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA base-pairing translational repressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in post-transcriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    meiosis regulator and mRNA stability factor 1
    Names
    limkain-b1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      15175015..15223368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125689.2 → XP_014981175.1  meiosis regulator and mRNA stability factor 1 isoform X3

      UniProtKB/TrEMBL
      I0FWQ3
      Conserved Domains (12) summary
      cd09977
      Location:876 → 937
      LOTUS_1_Limkain_b1; The first LOTUS domain on Limkain b1(LKAP)
      cd09978
      Location:1004 → 1074
      LOTUS_2_Limkain_b1; The second LOTUS domain on Limkain b1(LKAP)
      cd09979
      Location:1100 → 1171
      LOTUS_3_Limkain_b1; The third LOTUS domain on Limkain b1(LKAP)
      cd09980
      Location:1176 → 1247
      LOTUS_4_Limkain_b1; The fourth LOTUS domain on Limkain b1(LKAP)
      cd09981
      Location:1260 → 1330
      LOTUS_5_Limkain_b1; The fifth LOTUS domain on Limkain b1(LKAP)
      cd09982
      Location:1336 → 1406
      LOTUS_6_Limkain_b1; The sixth LOTUS domain on Limkain b1(LKAP)
      cd09983
      Location:1412 → 1484
      LOTUS_7_Limkain_b1; The seventh LOTUS domain on Limkain b1(LKAP)
      cd09984
      Location:1487 → 1562
      LOTUS_8_Limkain_b1; The eighth LOTUS domain on Limkain b1(LKAP)
      cd10910
      Location:352 → 494
      limkain_b1_N_like; N-terminal LabA-like domain of limkain b1 and similar proteins
      COG0724
      Location:776 → 872
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12255
      Location:509 → 581
      RRM1_LKAP; RNA recognition motif 1 in Limkain-b1 (LKAP) and similar proteins
      cd12256
      Location:787 → 875
      RRM2_LKAP; RNA recognition motif 2 in Limkain-b1 (LKAP) and similar proteins

    2. XM_015125688.2 → XP_014981174.1  meiosis regulator and mRNA stability factor 1 isoform X2

      UniProtKB/TrEMBL
      A0A8J8Y2Q4, F7EVN5, G7NPQ4, I0FWQ3
      Related
      ENSMMUP00000023701.3, ENSMMUT00000025335.4
      Conserved Domains (12) summary
      cd09977
      Location:876 → 937
      LOTUS_1_Limkain_b1; The first LOTUS domain on Limkain b1(LKAP)
      cd09978
      Location:1004 → 1074
      LOTUS_2_Limkain_b1; The second LOTUS domain on Limkain b1(LKAP)
      cd09979
      Location:1100 → 1171
      LOTUS_3_Limkain_b1; The third LOTUS domain on Limkain b1(LKAP)
      cd09980
      Location:1176 → 1247
      LOTUS_4_Limkain_b1; The fourth LOTUS domain on Limkain b1(LKAP)
      cd09981
      Location:1260 → 1330
      LOTUS_5_Limkain_b1; The fifth LOTUS domain on Limkain b1(LKAP)
      cd09982
      Location:1336 → 1406
      LOTUS_6_Limkain_b1; The sixth LOTUS domain on Limkain b1(LKAP)
      cd09983
      Location:1412 → 1484
      LOTUS_7_Limkain_b1; The seventh LOTUS domain on Limkain b1(LKAP)
      cd09984
      Location:1487 → 1562
      LOTUS_8_Limkain_b1; The eighth LOTUS domain on Limkain b1(LKAP)
      cd10910
      Location:352 → 494
      limkain_b1_N_like; N-terminal LabA-like domain of limkain b1 and similar proteins
      COG0724
      Location:776 → 872
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12255
      Location:510 → 582
      RRM1_LKAP; RNA recognition motif 1 in Limkain-b1 (LKAP) and similar proteins
      cd12256
      Location:787 → 875
      RRM2_LKAP; RNA recognition motif 2 in Limkain-b1 (LKAP) and similar proteins

    3. XM_015125686.2 → XP_014981172.1  meiosis regulator and mRNA stability factor 1 isoform X1

      UniProtKB/TrEMBL
      I0FWQ3
      Conserved Domains (12) summary
      cd09977
      Location:877 → 938
      LOTUS_1_Limkain_b1; The first LOTUS domain on Limkain b1(LKAP)
      cd09978
      Location:1005 → 1075
      LOTUS_2_Limkain_b1; The second LOTUS domain on Limkain b1(LKAP)
      cd09979
      Location:1101 → 1172
      LOTUS_3_Limkain_b1; The third LOTUS domain on Limkain b1(LKAP)
      cd09980
      Location:1177 → 1248
      LOTUS_4_Limkain_b1; The fourth LOTUS domain on Limkain b1(LKAP)
      cd09981
      Location:1261 → 1331
      LOTUS_5_Limkain_b1; The fifth LOTUS domain on Limkain b1(LKAP)
      cd09982
      Location:1337 → 1407
      LOTUS_6_Limkain_b1; The sixth LOTUS domain on Limkain b1(LKAP)
      cd09983
      Location:1413 → 1485
      LOTUS_7_Limkain_b1; The seventh LOTUS domain on Limkain b1(LKAP)
      cd09984
      Location:1488 → 1563
      LOTUS_8_Limkain_b1; The eighth LOTUS domain on Limkain b1(LKAP)
      cd10910
      Location:352 → 494
      limkain_b1_N_like; N-terminal LabA-like domain of limkain b1 and similar proteins
      COG0724
      Location:777 → 873
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12255
      Location:510 → 582
      RRM1_LKAP; RNA recognition motif 1 in Limkain-b1 (LKAP) and similar proteins
      cd12256
      Location:788 → 876
      RRM2_LKAP; RNA recognition motif 2 in Limkain-b1 (LKAP) and similar proteins

    4. XM_015125691.2 → XP_014981177.1  meiosis regulator and mRNA stability factor 1 isoform X4

      UniProtKB/TrEMBL
      F7FJ51
      Related
      ENSMMUP00000023699.4, ENSMMUT00000025333.4
      Conserved Domains (11) summary
      cd09977
      Location:734 → 795
      LOTUS_1_Limkain_b1; The first LOTUS domain on Limkain b1(LKAP)
      cd09978
      Location:862 → 932
      LOTUS_2_Limkain_b1; The second LOTUS domain on Limkain b1(LKAP)
      cd09979
      Location:958 → 1029
      LOTUS_3_Limkain_b1; The third LOTUS domain on Limkain b1(LKAP)
      cd09980
      Location:1034 → 1105
      LOTUS_4_Limkain_b1; The fourth LOTUS domain on Limkain b1(LKAP)
      cd09981
      Location:1118 → 1188
      LOTUS_5_Limkain_b1; The fifth LOTUS domain on Limkain b1(LKAP)
      cd09982
      Location:1194 → 1264
      LOTUS_6_Limkain_b1; The sixth LOTUS domain on Limkain b1(LKAP)
      cd09983
      Location:1270 → 1342
      LOTUS_7_Limkain_b1; The seventh LOTUS domain on Limkain b1(LKAP)
      cd09984
      Location:1345 → 1420
      LOTUS_8_Limkain_b1; The eighth LOTUS domain on Limkain b1(LKAP)
      cd10910
      Location:352 → 494
      limkain_b1_N_like; N-terminal LabA-like domain of limkain b1 and similar proteins
      COG0724
      Location:634 → 730
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12256
      Location:645 → 733
      RRM2_LKAP; RNA recognition motif 2 in Limkain-b1 (LKAP) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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