U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HOXB5 homeobox B5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696732, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    HOXB5provided by VGNC
    Official Full Name
    homeobox B5provided by VGNC
    Primary source
    VGNC:VGNC:104619
    See related
    Ensembl:ENSMMUG00000051420
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HOXB5 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (48200175..48204575)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (41291732..41296124)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene homeobox B7 Neighboring gene homeobox B8 Neighboring gene uncharacterized LOC106994015 Neighboring gene homeobox B6 Neighboring gene uncharacterized LOC106994016 Neighboring gene homeobox B3 Neighboring gene microRNA mir-10a Neighboring gene homeobox B4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anterior/posterior pattern specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    homeobox protein Hox-B5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      48200175..48204575
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001088160.3 → XP_001088160.1  homeobox protein Hox-B5

      See identical proteins and their annotated locations for XP_001088160.1

      UniProtKB/TrEMBL
      A0A5F7ZKH5, G7NHC8
      Related
      ENSMMUP00000065678.1, ENSMMUT00000092890.1
      Conserved Domains (2) summary
      PRK07003
      Location:67 → 171
      PRK07003; DNA polymerase III subunit gamma/tau
      pfam00046
      Location:198 → 251
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.