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    POM121C POM121 transmembrane nucleoporin C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716176, updated on 5-Mar-2024

    Summary

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    Gene symbol
    POM121C
    Gene description
    POM121 transmembrane nucleoporin C
    See related
    Ensembl:ENSMMUG00000022772
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    POM121
    Orthologs
    human mouse all
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    Genomic context

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    See POM121C in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (45595648..45650480)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (41808197..41863899)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene huntingtin interacting protein 1 Neighboring gene uncharacterized LOC114676879 Neighboring gene uncharacterized LOC106997355 Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene uncharacterized LOC114676880 Neighboring gene NOP2/Sun RNA methyltransferase 5 Neighboring gene tripartite motif containing 50 Neighboring gene FKBP prolyl isomerase family member 6 (inactive)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear localization sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear envelope pore membrane protein POM 121C
    Names
    POM121 membrane glycoprotein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      45595648..45650480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015133306.2 → XP_014988792.2  nuclear envelope pore membrane protein POM 121C isoform X3

      UniProtKB/TrEMBL
      H9G2L4
      Conserved Domains (3) summary
      PHA03247
      Location:300 → 483
      PHA03247; large tegument protein UL36; Provisional
      pfam15229
      Location:52 → 287
      POM121; POM121 family
      pfam15967
      Location:783 → 967
      Nucleoporin_FG2; Nucleoporin FG repeated region

    2. XM_001110260.4 → XP_001110260.2  nuclear envelope pore membrane protein POM 121C isoform X1

      UniProtKB/TrEMBL
      F7G907, F7HEM9
      Related
      ENSMMUP00000003364.4, ENSMMUT00000003560.4
      Conserved Domains (3) summary
      PHA03247
      Location:538 → 721
      PHA03247; large tegument protein UL36; Provisional
      pfam15229
      Location:290 → 525
      POM121; POM121 family
      pfam15967
      Location:1021 → 1205
      Nucleoporin_FG2; Nucleoporin FG repeated region

    3. XM_028845669.1 → XP_028701502.1  nuclear envelope pore membrane protein POM 121C isoform X2

      UniProtKB/TrEMBL
      A0A5F8A1Q5, F7G907
      Related
      ENSMMUP00000070825.1, ENSMMUT00000096418.1
      Conserved Domains (3) summary
      PHA03247
      Location:517 → 945
      PHA03247; large tegument protein UL36; Provisional
      pfam15229
      Location:290 → 525
      POM121; POM121 family
      pfam15967
      Location:962 → 1146
      Nucleoporin_FG2; Nucleoporin FG repeated region
    Nucleotide Protein
    Heading Accession and Version

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